RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FARP2O94887 1054 aaPredicted RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 CANXP27824 592 aaKnown RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 PMLP29590 882 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 JAM2P57087 298 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 LACTBP83111 547 aaPredicted RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 TUSC3Q13454 348 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 CDCA2Q69YH5 1023 aaPredicted RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 KCTD1Q719H9 257 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 OVCH1Q7RTY7 1134 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 PTRH1Q86Y79 214 aaKnown RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 FAM177A1Q8N128 213 aaPredicted RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 AHI1Q8N157 1196 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 ARRDC4Q8NCT1 418 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 DDX1Q92499 740 aaKnown RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 SGPP1Q9BX95 441 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 CD244Q9BZW8 370 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 CNTD2Q9H8S5 307 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 CABP5Q9NP86 173 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 RREB1Q92766 1687 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 SBNO2Q9Y2G9 1366 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 MYOM2P54296 1465 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 AMY2AP04746 511 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 PFKLP17858 780 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 AMY2BP19961 511 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 POU3F2P20265 443 aaPredicted RBP7.04□□□□□ -1.28
CCDC171-207ENST00000478913 CDR1P51861 262 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 NCKAP1LP55160 1127 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 TARBP2Q15633 366 aaKnown RBP7.04□□□□□ -1.28
CCDC171-207ENST00000478913 FIGNQ5HY92 759 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 ETV3LQ6ZN32 361 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 SYDE1Q6ZW31 735 aaPredicted RBP7.04□□□□□ -1.28
CCDC171-207ENST00000478913 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.04□□□□□ -1.28
CCDC171-207ENST00000478913 LDHDQ86WU2 507 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 RBM12BQ8IXT5 1001 aaKnown RBP7.04□□□□□ -1.28
CCDC171-207ENST00000478913 NLGN4XQ8N0W4 816 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 C2orf69Q8N8R5 385 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 SH3RF2Q8TEC5 729 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 KCNN1Q92952 543 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 FAM122AQ96E09 287 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 FAM84AQ96KN4 292 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 RNF38Q9H0F5 515 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 SMURF1Q9HCE7 757 aa7.04□□□□□ -1.28
CCDC171-207ENST00000478913 MST1RQ04912 1400 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 A0A087X0B3 334 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 MAN2B1O00754 1011 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 KCNK3O14649 394 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 N4BP3O15049 544 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 KIF3BO15066 747 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 LTFP02788 710 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 ASGR2P07307 311 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 NCAM1P13591 858 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 FBLN1P23142 703 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 PLA2G5P39877 138 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 MASP1P48740 699 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 MESP2Q0VG99 397 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 SLC15A2Q16348 729 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 RNF187Q5TA31 235 aaPredicted RBP7.03□□□□□ -1.28
CCDC171-207ENST00000478913 MIB1Q86YT6 1006 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 FAM126BQ8IXS8 530 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 CHST14Q8NCH0 376 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 MZB1Q8WU39 189 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 DDX11Q96FC9 970 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 SLC38A3Q99624 504 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 TMX1Q9H3N1 280 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 DTLQ9NZJ0 730 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 MAPRE3Q9UPY8 281 aa7.03□□□□□ -1.28
CCDC171-207ENST00000478913 ABCC5O15440 1437 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 SLIT1O75093 1534 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 SLC12A8A0AV02 714 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 TMEM253P0C7T8 217 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 EPHB3P54753 998 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 EPHA5P54756 1037 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 DLG4P78352 724 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 GRIN1Q05586 938 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 HHIPL2Q6UWX4 724 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 ZNF662Q6ZS27 426 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 ZC3H18Q86VM9 953 aaKnown RBP7.02□□□□□ -1.29
CCDC171-207ENST00000478913 THNSL2Q86YJ6 484 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 SMC1BQ8NDV3 1235 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 CLEC4DQ8WXI8 215 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 PPP1R16BQ96T49 567 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 GCM1Q9NP62 436 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 TELO2Q9Y4R8 837 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 PCDHA5Q9Y5H7 936 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 ATP23Q9Y6H3 246 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 TMEM2Q9UHN6 1383 aa7.02□□□□□ -1.29
CCDC171-207ENST00000478913 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 CBX4O00257 560 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 ETV2O00321 342 aaPredicted RBP7.01□□□□□ -1.29
CCDC171-207ENST00000478913 GLDCP23378 1020 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 POLD1P28340 1107 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 SOX5P35711 763 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 MC3RP41968 323 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 MECP2P51608 486 aaKnown RBP7.01□□□□□ -1.29
CCDC171-207ENST00000478913 PCBP1Q15365 356 aaKnown RBP eCLIP7.01□□□□□ -1.29
CCDC171-207ENST00000478913 ARHGAP44Q17R89 818 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms