RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PLCB3Q01970 1234 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 FAM102BQ5T8I3 360 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 SLC24A5Q71RS6 500 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 ERMP1Q7Z2K6 904 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 MRPS27Q92552 414 aaKnown RBP23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 ADAM2Q99965 735 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 TCF25Q9BQ70 676 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 APOL5Q9BWW9 433 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 CWH43Q9H720 699 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 JADE2Q9NQC1 790 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 TSHZ2Q9NRE2 1034 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 SLC9A2Q9UBY0 812 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 DENND3A2RUS2 1198 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 BRD1O95696 1058 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 APOBRQ0VD83 1088 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 LLGL2Q6P1M3 1020 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 MTHFD1LQ6UB35 978 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 PLPPR4Q7Z2D5 763 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 MAP3K14Q99558 947 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 PSTPIP2Q9H939 334 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 ENTPD7Q9NQZ7 604 aa23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 NOC2LQ9Y3T9 749 aaKnown RBP23.19■■□□□ 1.3
PDLIM1-202ENST00000477757 RPS6KA5O75582 802 aa23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 CYP21A2P08686 494 aa23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 SMARCA1P28370 1054 aa23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 RALYLQ86SE5 291 aaKnown RBP23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 TMEM40Q8WWA1 233 aa23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 NECTIN4Q96NY8 510 aa23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 NGRNQ9NPE2 291 aaKnown RBP23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 PUF60Q9UHX1 559 aaKnown RBP23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 U3KPZ7 1027 aaPredicted RBP23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 ZNF292O60281 2723 aa23.18■■□□□ 1.3
PDLIM1-202ENST00000477757 HIDE1A8MVS5 230 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 PDE4AP27815 886 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 ACTR2P61160 394 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 TPRNQ4KMQ1 711 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 ODR4Q5SWX8 454 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 B4GALNT3Q6L9W6 998 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 CTCFLQ8NI51 663 aaPredicted RBP23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 CASP10Q92851 521 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 POMKQ9H5K3 350 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 TMEM161AQ9NX61 479 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 CDH22Q9UJ99 828 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 GINS2Q9Y248 185 aa23.17■■□□□ 1.3
PDLIM1-202ENST00000477757 NFASCO94856 1347 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 SPDYE3A6NKU9 549 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 C2CD4DB7Z1M9 353 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 DDAH1O94760 285 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 FGFR1P11362 822 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 KIF5BP33176 963 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 STAT5BP51692 787 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 UBE2SQ16763 222 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 ASTLQ6HA08 431 aaPredicted RBP23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 NCOA7Q8NI08 942 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 ATP6V0A4Q9HBG4 840 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 KCNH7Q9NS40 1196 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 ST3GAL5Q9UNP4 418 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 TAF6LQ9Y6J9 622 aa23.16■■□□□ 1.3
PDLIM1-202ENST00000477757 PPM1AP35813 382 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 SLC26A2P50443 739 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 ANTXR2P58335 489 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 FAM189BP81408 668 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 NUCB1Q02818 461 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 ITIH3Q06033 890 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 MCTP2Q6DN12 878 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 FRMD5Q7Z6J6 570 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 ZNF654Q8IZM8 581 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 NKD2Q969F2 451 aaPredicted RBP23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 LZTS2Q9BRK4 669 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 SDF4Q9BRK5 362 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 MYL10Q9BUA6 226 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 ADAM7Q9H2U9 754 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 SMOC2Q9H3U7 446 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 ELAC1Q9H777 363 aaKnown RBP23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 CDHR5Q9HBB8 845 aa23.15■■□□□ 1.3
PDLIM1-202ENST00000477757 E7EWF7 191 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 GPR182O15218 404 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 KLRC1P26715 233 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 CES5AQ6NT32 575 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 KIAA0319LQ8IZA0 1049 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 IGDCC4Q8TDY8 1250 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 TMEM117Q9H0C3 514 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 HCFC2Q9Y5Z7 792 aa23.14■■□□□ 1.29
PDLIM1-202ENST00000477757 DMXL1Q9Y485 3027 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 PLEKHA8P1O95397 391 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 KCNT2Q6UVM3 1135 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 LRRC43Q8N309 656 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 ZNF558Q96NG5 402 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 MXRA8Q9BRK3 442 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 PCDHA6Q9UN73 950 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 PCDHA8Q9Y5H6 950 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 COL1A2P08123 1366 aa23.13■■□□□ 1.29
PDLIM1-202ENST00000477757 HOXA2O43364 376 aa23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 MTHFRP42898 656 aa23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 ID4P47928 161 aa23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 CLCN5P51795 746 aa23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 ITGB3BPQ13352 177 aaPredicted RBP23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 FAM228AQ86W67 206 aa23.12■■□□□ 1.29
PDLIM1-202ENST00000477757 MB21D2Q8IYB1 491 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms