RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 GPBP1Q86WP2 473 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 ZC3H3Q8IXZ2 948 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 GOLGA5Q8TBA6 731 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 NSUN6Q8TEA1 469 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 TMEM174Q8WUU8 243 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 AGBL1Q96MI9 1066 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 MPHOSPH6Q99547 160 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 SENP7Q9BQF6 1050 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 NUDT12Q9BQG2 462 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 EIF2AK1Q9BQI3 630 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 PDCD2LQ9BRP1 358 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 ACAD9Q9H845 621 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 RNF146Q9NTX7 359 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 PANK4Q9NVE7 773 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 INTS13Q9NVM9 706 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 KCNG1Q9UIX4 513 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 DBR1Q9UK59 544 aaKnown RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 ZNF214Q9UL59 606 aaPredicted RBP7.39□□□□□ -1.23
LDB3-206ENST00000477489 FAM184BQ9ULE4 1060 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 KCNH4Q9UQ05 1017 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 DAAM1Q9Y4D1 1078 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 PAXBP1Q9Y5B6 917 aa7.39□□□□□ -1.23
LDB3-206ENST00000477489 A0A1W2PQJ5 194 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 WDR64B1ANS9 1081 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 AKR1B15C9JRZ8 316 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 E9PMD0 336 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 NFIBO00712 420 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 TBCAO75347 108 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 DDNO94850 711 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 SLITRK3O94933 977 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 SLC25A27O95847 323 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 IDEP14735 1019 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 GUCY2CP25092 1073 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 RPL13P26373 211 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 STAT3P40763 770 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 HMGCS2P54868 508 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 STX17P56962 302 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 FKBP1BP68106 108 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 PPIL2Q13356 520 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 MTMR1Q13613 665 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 MYBPC2Q14324 1141 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 PGM5Q15124 567 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 ECM1Q16610 540 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 MAN2A1Q16706 1144 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 GNPTABQ3T906 1256 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 ZCWPW2Q504Y3 356 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 ZNF746Q6NUN9 644 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 FASTKD5Q7L8L6 764 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 KCNK18Q7Z418 384 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 VSIG10LQ86VR7 867 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 TMTC1Q8IUR5 882 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 C4orf19Q8IY42 314 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 SMAP1Q8IYB5 467 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 CCAR2Q8N163 923 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 ZKSCAN4Q969J2 545 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 ATG4CQ96DT6 458 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 ZNF830Q96NB3 372 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 ERGIC2Q96RQ1 377 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 RMDN3Q96TC7 470 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 PLIN2Q99541 437 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 BAG1Q99933 345 aaPredicted RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 DUSP9Q99956 384 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 SRRTQ9BXP5 876 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 ZSWIM4Q9H7M6 989 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 RAVER2Q9HCJ3 691 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 AGO4Q9HCK5 861 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 PXMP2Q9NR77 195 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 KCNH7Q9NS40 1196 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 CGNQ9P2M7 1197 aaKnown RBP7.38□□□□□ -1.23
LDB3-206ENST00000477489 PYCARDQ9ULZ3 195 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 TRAF3IP3Q9Y228 551 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 PCDHA2Q9Y5H9 948 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 SNCAIPQ9Y6H5 919 aa7.38□□□□□ -1.23
LDB3-206ENST00000477489 A0A0G2JLL6 359 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 PDXKO00764 312 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 SLC16A3O15427 465 aaKnown RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 CALUO43852 315 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 MFAP3LO75121 409 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 FCER1AP12319 257 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 ITGB5P18084 799 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 ICAM3P32942 547 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 EPHX2P34913 555 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 QARSP47897 775 aaKnown RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 ZNF131P52739 623 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 CDK17Q00537 523 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 LRMPQ12912 555 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 VGLL4Q14135 290 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 GIT2Q14161 759 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 HSP90AA2PQ14568 343 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 HERC4Q5GLZ8 1057 aaPredicted RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 ZNF697Q5TEC3 545 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 PRPF38BQ5VTL8 546 aaKnown RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 ARHGEF16Q5VV41 709 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 ANKRD40Q6AI12 368 aa7.37□□□□□ -1.23
LDB3-206ENST00000477489 SNRNP48Q6IEG0 339 aaKnown RBP7.37□□□□□ -1.23
LDB3-206ENST00000477489 BRICD5Q6PL45 260 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms