RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 DOCK6Q96HP0 2047 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 PTPDC1A2A3K4 754 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 RNF113AO15541 343 aaKnown RBP7.51□□□□□ -1.21
CLDN4-205ENST00000476494 SGSM2O43147 1006 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 LAMTOR5O43504 91 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 TTLL1O95922 423 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 MCCP23508 829 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 RBM25P49756 843 aaKnown RBP7.51□□□□□ -1.21
CLDN4-205ENST00000476494 FZD5Q13467 585 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 LAMC2Q13753 1193 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 RCSD1Q6JBY9 416 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 TSSK4Q6SA08 328 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 RNF207Q6ZRF8 634 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 SEPT14Q6ZU15 432 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 KCTD1Q719H9 257 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 GPR149Q86SP6 731 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 PDZD3Q86UT5 571 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 SLC22A17Q8WUG5 538 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 ACSF2Q96CM8 615 aaPredicted RBP7.51□□□□□ -1.21
CLDN4-205ENST00000476494 GPR20Q99678 358 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 C22orf23Q9BZE7 217 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 PRMT8Q9NR22 394 aaPredicted RBP7.51□□□□□ -1.21
CLDN4-205ENST00000476494 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
CLDN4-205ENST00000476494 F5P12259 2224 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 H3BRB1 525 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 SEC24BO95487 1268 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 CHGBP05060 677 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 KCNA4P22459 653 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 ANP32AP39687 249 aaKnown RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 UBE3CQ15386 1083 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 LPAL2Q16609 132 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 MCMDC2Q4G0Z9 681 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 SBK1Q52WX2 424 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 LARP1BQ659C4 914 aaKnown RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 DCLRE1AQ6PJP8 1040 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 CWC27Q6UX04 472 aaKnown RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 BTNL9Q6UXG8 535 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 CELF5Q8N6W0 485 aaKnown RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 ZCCHC14Q8WYQ9 949 aaKnown RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 CLDN23Q96B33 292 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 KIF12Q96FN5 646 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 TBC1D32Q96NH3 1257 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 USP26Q9BXU7 913 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 OSBPL6Q9BZF3 934 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 TUT1Q9H6E5 874 aaKnown RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 TYW1Q9NV66 732 aaKnown RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 SETD4Q9NVD3 440 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 SPATA6Q9NWH7 488 aaPredicted RBP7.5□□□□□ -1.21
CLDN4-205ENST00000476494 COL20A1Q9P218 1284 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 KALRNO60229 2985 aa7.5□□□□□ -1.21
CLDN4-205ENST00000476494 PLIN4Q96Q06 1357 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 KANSL1LA0AUZ9 987 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 SHISA7A6NL88 538 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 GIPC1O14908 333 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 MBD4O95243 580 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 EPCAMP16422 314 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 SLC1A4P43007 532 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 ANAPC15P60006 121 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 SP2Q02086 613 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 LETM2Q2VYF4 491 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 ZMYM1Q5SVZ6 1142 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 CELF3Q5SZQ8 465 aaKnown RBP7.49□□□□□ -1.21
CLDN4-205ENST00000476494 IL31Q6EBC2 164 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 TMC5Q6UXY8 1006 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 RUFY4Q6ZNE9 571 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 LRRC55Q6ZSA7 311 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 TSHZ1Q6ZSZ6 1077 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 THNSL1Q8IYQ7 743 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 RGS22Q8NE09 1264 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 TBC1D5Q92609 795 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 NXPE3Q969Y0 559 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 DDRGK1Q96HY6 314 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 FAM126AQ9BYI3 521 aaPredicted RBP7.49□□□□□ -1.21
CLDN4-205ENST00000476494 TMX1Q9H3N1 280 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 BCAS3Q9H6U6 928 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 EPS15L1Q9UBC2 864 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 ACACAQ13085 2346 aa7.49□□□□□ -1.21
CLDN4-205ENST00000476494 TEP1Q99973 2627 aaKnown RBP7.48□□□□□ -1.21
CLDN4-205ENST00000476494 MYH15Q9Y2K3 1946 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 SPAG17Q6Q759 2223 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 SHROOM3Q8TF72 1996 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 ANHXE9PGG2 379 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 C1QL1O75973 258 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 STAG3L1P0CL83 205 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 CD52P31358 61 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 ADD2P35612 726 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 NMIQ13287 307 aaPredicted RBP7.48□□□□□ -1.21
CLDN4-205ENST00000476494 WTAPQ15007 396 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 PTPN14Q15678 1187 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 FAM102BQ5T8I3 360 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 TTBK2Q6IQ55 1244 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 MAMSTRQ6ZN01 415 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 CCDC149Q6ZUS6 474 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 NEDD1Q8NHV4 660 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 LMBR1Q8WVP7 490 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 APPBP2Q92624 585 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 CHMP4CQ96CF2 233 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 TAAR1Q96RJ0 339 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms