RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 AJUBAQ96IF1 538 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 OR10A5Q9H207 317 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 FBXO10Q9UK96 956 aa9.19□□□□□ -0.94
SMC5-203ENST00000475540 B4GALT3O60512 393 aa9.18□□□□□ -0.94
SMC5-203ENST00000475540 B4GALT4O60513 344 aa9.18□□□□□ -0.94
SMC5-203ENST00000475540 FOXD2O60548 495 aaPredicted RBP9.18□□□□□ -0.94
SMC5-203ENST00000475540 SLC9A1P19634 815 aa9.18□□□□□ -0.94
SMC5-203ENST00000475540 KATNBL1Q9H079 304 aa9.18□□□□□ -0.94
SMC5-203ENST00000475540 OXSMQ9NWU1 459 aa9.18□□□□□ -0.94
SMC5-203ENST00000475540 SPO11Q9Y5K1 396 aa9.18□□□□□ -0.94
SMC5-203ENST00000475540 ZNF536O15090 1300 aa9.17□□□□□ -0.94
SMC5-203ENST00000475540 ATP2A2P16615 1042 aaKnown RBP9.17□□□□□ -0.94
SMC5-203ENST00000475540 NME9Q86XW9 330 aa9.17□□□□□ -0.94
SMC5-203ENST00000475540 PASD1Q8IV76 773 aa9.17□□□□□ -0.94
SMC5-203ENST00000475540 FOXRED1Q96CU9 486 aaPredicted RBP9.17□□□□□ -0.94
SMC5-203ENST00000475540 CARD11Q9BXL7 1154 aa9.17□□□□□ -0.94
SMC5-203ENST00000475540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMC5-203ENST00000475540 SYN1P17600 705 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 ADCY8P40145 1251 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 CD83Q01151 205 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 ALDH6A1Q02252 535 aaKnown RBP9.16□□□□□ -0.94
SMC5-203ENST00000475540 DSG1Q02413 1049 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 TOP3AQ13472 1001 aaPredicted RBP9.16□□□□□ -0.94
SMC5-203ENST00000475540 USP10Q14694 798 aaKnown RBP9.16□□□□□ -0.94
SMC5-203ENST00000475540 ARHGEF18Q6ZSZ5 1173 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 OTOP2Q7RTS6 562 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 RALYLQ86SE5 291 aaKnown RBP9.16□□□□□ -0.94
SMC5-203ENST00000475540 RTN4RL1Q86UN2 441 aaPredicted RBP9.16□□□□□ -0.94
SMC5-203ENST00000475540 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 ELF4Q99607 663 aaPredicted RBP9.16□□□□□ -0.94
SMC5-203ENST00000475540 FOXB1Q99853 325 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 TOMM22Q9NS69 142 aa9.16□□□□□ -0.94
SMC5-203ENST00000475540 A0A087X0B3 334 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 UBA6A0AVT1 1052 aaPredicted RBP9.15□□□□□ -0.94
SMC5-203ENST00000475540 ZNF891A8MT65 544 aaPredicted RBP9.15□□□□□ -0.94
SMC5-203ENST00000475540 PDE8AO60658 829 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 PTX3P26022 381 aaPredicted RBP9.15□□□□□ -0.94
SMC5-203ENST00000475540 APEX1P27695 318 aaKnown RBP9.15□□□□□ -0.94
SMC5-203ENST00000475540 CSF2RBP32927 897 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 PPP2CBP62714 309 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 PPP2CAP67775 309 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 ADCY1Q08828 1119 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 KANK2Q63ZY3 851 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 OR2W6PQ8NHA6 318 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 CHTF18Q8WVB6 975 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 LEO1Q8WVC0 666 aaPredicted RBP9.15□□□□□ -0.94
SMC5-203ENST00000475540 C16orf92Q96LL3 132 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 ZDHHC5Q9C0B5 715 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 THG1LQ9NWX6 298 aaKnown RBP9.15□□□□□ -0.94
SMC5-203ENST00000475540 MAPRE3Q9UPY8 281 aa9.15□□□□□ -0.94
SMC5-203ENST00000475540 GSG1L2A8MUP6 293 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 PLATP00750 562 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 KPNA1P52294 538 aaPredicted RBP9.14□□□□□ -0.95
SMC5-203ENST00000475540 OCRLQ01968 901 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 ROM1Q03395 351 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 PLP2Q04941 152 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 MOGSQ13724 837 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 EPHA7Q15375 998 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 SKOR2Q2VWA4 1001 aaPredicted RBP9.14□□□□□ -0.95
SMC5-203ENST00000475540 TTC38Q5R3I4 469 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 ZZZ3Q8IYH5 903 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 BDH2Q9BUT1 245 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 JADE2Q9NQC1 790 aa9.14□□□□□ -0.95
SMC5-203ENST00000475540 H2AFY2Q9P0M6 372 aaPredicted RBP9.14□□□□□ -0.95
SMC5-203ENST00000475540 A0A0G2JNJ9 132 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 LAMTOR5O43504 91 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 ETV4P43268 484 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 KCNQ1P51787 676 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 SLC6A3Q01959 620 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 TBC1D10BQ4KMP7 808 aaPredicted RBP9.13□□□□□ -0.95
SMC5-203ENST00000475540 CREB3L3Q68CJ9 461 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 GRAMD4Q6IC98 578 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 GPR155Q7Z3F1 870 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 EFHBQ8N7U6 833 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 MAML3Q96JK9 1138 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 SCYL1Q96KG9 808 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 TUBGCP5Q96RT8 1024 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 Q9UFV3 132 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 CDC42EP3Q9UKI2 254 aa9.13□□□□□ -0.95
SMC5-203ENST00000475540 PRLP01236 227 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 HMGCRP04035 888 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 CELA3BP08861 270 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 MAP3K12Q12852 859 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 EIF4HQ15056 248 aaKnown RBP9.12□□□□□ -0.95
SMC5-203ENST00000475540 SEPT7Q16181 437 aaKnown RBP9.12□□□□□ -0.95
SMC5-203ENST00000475540 ZNF568Q3ZCX4 644 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 LCE4AQ5TA78 99 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 SMC1BQ8NDV3 1235 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 GPR101Q96P66 508 aaPredicted RBP9.12□□□□□ -0.95
SMC5-203ENST00000475540 KRTAP4-2Q9BYR5 136 aa9.12□□□□□ -0.95
SMC5-203ENST00000475540 ZNF888P0CJ79 500 aaPredicted RBP9.11□□□□□ -0.95
SMC5-203ENST00000475540 IL2P60568 153 aa9.11□□□□□ -0.95
SMC5-203ENST00000475540 ZMAT1Q5H9K5 638 aa9.11□□□□□ -0.95
SMC5-203ENST00000475540 SLFN12LQ6IEE8 588 aa9.11□□□□□ -0.95
SMC5-203ENST00000475540 TIGD7Q6NT04 549 aaPredicted RBP9.11□□□□□ -0.95
SMC5-203ENST00000475540 GLB1LQ6UWU2 654 aa9.11□□□□□ -0.95
SMC5-203ENST00000475540 RGS3P49796 1198 aa9.1□□□□□ -0.95
SMC5-203ENST00000475540 RRADP55042 308 aa9.1□□□□□ -0.95
SMC5-203ENST00000475540 PRAMEF9Q5VWM5 478 aa9.1□□□□□ -0.95
SMC5-203ENST00000475540 TMEM200BQ69YZ2 307 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms