RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 KRT12Q99456 494 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 PLVAPQ9BX97 442 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 MKNK2Q9HBH9 465 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 SPATS2LQ9NUQ6 558 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 DDX20Q9UHI6 824 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 COL1A1P02452 1464 aaPredicted RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 RCCD1A6NED2 376 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 MYO1FO00160 1098 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF263O14978 683 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CETN3O15182 167 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 PPFIA2O75334 1257 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 PALMO75781 387 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 PLEKHA8P1O95397 391 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 GLI1P08151 1106 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 FERP16591 822 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 MAN1A1P33908 653 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CARSP49589 748 aaKnown RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 HUNKP57058 714 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 LACTBP83111 547 aaPredicted RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 GUCY1A3Q02108 690 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CMPK2Q5EBM0 449 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 SPDYAQ5MJ70 313 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 FAM83BQ5T0W9 1011 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 ERMARDQ5T6L9 678 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 DENND2CQ68D51 928 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 RGMBQ6NW40 437 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 USP50Q70EL3 339 aaPredicted RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 FRMD5Q7Z6J6 570 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CEP57Q86XR8 500 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 SRBD1Q8N5C6 995 aaKnown RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 NEK9Q8TD19 979 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 SMCR8Q8TEV9 937 aaPredicted RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CCT6BQ92526 530 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 DPF3Q92784 378 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 HVCN1Q96D96 273 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CSRNP1Q96S65 589 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 FMO2Q99518 471 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 ZKSCAN3Q9BRR0 538 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 RIOK1Q9BRS2 568 aaKnown RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 TANGO6Q9C0B7 1094 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CARD9Q9H257 536 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 CENPHQ9H3R5 247 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 PLEKHA4Q9H4M7 779 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 EBF2Q9HAK2 575 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 PPANQ9NQ55 473 aaKnown RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 FAM207AQ9NSI2 230 aaPredicted RBP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 SLC12A4Q9UP95 1085 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.73□□□□□ -1.01
CCDC93-208ENST00000474546 PFASO15067 1338 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 NUP98P52948 1817 aa8.73□□□□□ -1.01
CCDC93-208ENST00000474546 LOC102724428A0A0B4J2F2 783 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 H0YIN7 160 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 KRIT1O00522 736 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 SLC16A3O15427 465 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 EVI5O60447 810 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 SUN1O94901 812 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 BAG3O95817 575 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 LDHCP07864 332 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 H2AFZP0C0S5 128 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 RASSF2P50749 326 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 CCNG1P51959 295 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 SIK1P57059 783 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 ATP11AP98196 1134 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 HDLBPQ00341 1268 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF844Q08AG5 666 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 CCDC15Q0P6D6 951 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF268Q14587 947 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 KRT71Q3SY84 523 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 HGSNATQ68CP4 663 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 KCTD16Q68DU8 428 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 H2AFVQ71UI9 128 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 PEX26Q7Z412 305 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 TMC3Q7Z5M5 1100 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 SLFN11Q7Z7L1 901 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 ZC3H3Q8IXZ2 948 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 GSPT2Q8IYD1 628 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 GPC2Q8N158 579 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 REXO1Q8N1G1 1221 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 PNMA1Q8ND90 353 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 SH3TC2Q8TF17 1288 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 MAIP1Q8WWC4 291 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 CASKIN2Q8WXE0 1202 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 TLCD1Q96CP7 247 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 XPO6Q96QU8 1125 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 SPAG5Q96R06 1193 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 SH3GL3Q99963 347 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 C1QTNF1Q9BXJ1 281 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 ANKRD2Q9GZV1 360 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 PABPC3Q9H361 631 aaKnown RBP8.72□□□□□ -1.01
CCDC93-208ENST00000474546 PPCSQ9HAB8 311 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 MLXIPQ9HAP2 919 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 INCENPQ9NQS7 918 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 HAUS2Q9NVX0 235 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 PCDHA6Q9UN73 950 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 PCDHA8Q9Y5H6 950 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 NR2E3Q9Y5X4 410 aa8.72□□□□□ -1.01
CCDC93-208ENST00000474546 BAHCC1Q9P281 2608 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms