RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 FCGRTP55899 365 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 TMEM119Q4V9L6 283 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 CC2D1AQ6P1N0 951 aaPredicted RBP23■■□□□ 1.27
SMIM11A-204ENST00000474455 MIER3Q7Z3K6 550 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 BANK1Q8NDB2 785 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 CD99L2Q8TCZ2 262 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 GOLGA1Q92805 767 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 PAGE5Q96GU1 130 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 SAMM50Q9Y512 469 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 C11orf97A0A1B0GVM6 126 aaPredicted RBP23■■□□□ 1.27
SMIM11A-204ENST00000474455 HOXC6P09630 235 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 RPA1P27694 616 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 NR1I3Q14994 352 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 HYIQ5T013 277 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 CCDC62Q6P9F0 684 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 SH3RF1Q7Z6J0 888 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 TPH2Q8IWU9 490 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 TXLNBQ8N3L3 684 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 SPATA20Q8TB22 786 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 CDK5RAP3Q96JB5 506 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 BLZF1Q9H2G9 400 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 JPH1Q9HDC5 661 aaPredicted RBP22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 SLC9A2Q9UBY0 812 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 NFASCO94856 1347 aa22.99■■□□□ 1.27
SMIM11A-204ENST00000474455 LOC102724159A0A0B4J2E5 919 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 A0A1B0GTH6 734 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 GPR25O00155 361 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 RGS2P41220 211 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 ADCYAP1R1P41586 468 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 FLT3LGP49771 235 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 PRKCZQ05513 592 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 MCM6Q14566 821 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 PWP2Q15269 919 aaKnown RBP22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 EPHA7Q15375 998 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 ARFGAP3Q9NP61 516 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 AKR1B15C9JRZ8 316 aaPredicted RBP22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 GGPS1O95749 300 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 CCDC175P0C221 793 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 BRD3Q15059 726 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 UGCGQ16739 394 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 TRMT1LQ7Z2T5 733 aaKnown RBP22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 ERMNQ8TAM6 284 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 WDR24Q96S15 920 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 SENP7Q9BQF6 1050 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 POLR3CQ9BUI4 534 aaPredicted RBP22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 SLC5A4Q9NY91 659 aa22.98■■□□□ 1.27
SMIM11A-204ENST00000474455 FARP2O94887 1054 aaPredicted RBP22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 TXNP10599 105 aaKnown RBP22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 GPS2Q13227 327 aa22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 HAUS3Q68CZ6 603 aa22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 TOGARAM2Q6ZUX3 1019 aa22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 PIGOQ8TEQ8 1089 aa22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 SOCS4Q8WXH5 440 aa22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 SYNGAP1Q96PV0 1343 aa22.97■■□□□ 1.27
SMIM11A-204ENST00000474455 ADCY6O43306 1168 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 TGFB3P10600 412 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 ACTR2P61160 394 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 KRT76Q01546 638 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 GOLGA8FQ08AF8 430 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 GOLGA8DPQ0D2H9 430 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 CUL4BQ13620 913 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 ACVR2BQ13705 512 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 APBA2Q99767 749 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 ZNF746Q6NUN9 644 aaPredicted RBP22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 RAD54LQ92698 747 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 CCDC51Q96ER9 411 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 CTAGE1Q96RT6 745 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 LXNQ9BS40 222 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 VTA1Q9NP79 307 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 KBTBD4Q9NVX7 518 aa22.96■■□□□ 1.27
SMIM11A-204ENST00000474455 CASP8AP2Q9UKL3 1982 aa22.95■■□□□ 1.27
SMIM11A-204ENST00000474455 KDM3AQ9Y4C1 1321 aa22.95■■□□□ 1.27
SMIM11A-204ENST00000474455 CCDC151A5D8V7 595 aa22.95■■□□□ 1.26
SMIM11A-204ENST00000474455 IGHA2P01877 340 aa22.95■■□□□ 1.26
SMIM11A-204ENST00000474455 HSDL1Q3SXM5 330 aa22.95■■□□□ 1.26
SMIM11A-204ENST00000474455 ZNF296Q8WUU4 475 aaPredicted RBP22.95■■□□□ 1.26
SMIM11A-204ENST00000474455 LARP4BQ92615 738 aaKnown RBP22.95■■□□□ 1.26
SMIM11A-204ENST00000474455 ABHD16BQ9H3Z7 469 aa22.95■■□□□ 1.26
SMIM11A-204ENST00000474455 WDR64B1ANS9 1081 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 NEDD9Q14511 834 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 TTLL4Q14679 1199 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 CELF3Q5SZQ8 465 aaKnown RBP22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 SPATA1Q5VX52 437 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 ABHD15Q6UXT9 468 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 MSL3Q8N5Y2 521 aaKnown RBP22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 SCFD2Q8WU76 684 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 SH2D3AQ9BRG2 576 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 NT5C3AQ9H0P0 336 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 MLXIPQ9HAP2 919 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 PCDHA10Q9Y5I2 948 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 GSTTP1A0A1W2PQM5 241 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 RBM47A0AV96 593 aaKnown RBP22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 TMEM150BA6NC51 233 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 ERICH4A6NGS2 130 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 ADKP55263 362 aaKnown RBP22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 TRIM32Q13049 653 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 KIF22Q14807 665 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 SWSAP1Q6NVH7 229 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 PPFIBP1Q86W92 1011 aa22.94■■□□□ 1.26
SMIM11A-204ENST00000474455 CCDC60Q8IWA6 550 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms