RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ERLIN1O75477 346 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 EYA4O95677 639 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 ASNSP08243 561 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 CYP11B2P19099 503 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 TGFB2P61812 414 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 KIF5AQ12840 1032 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 BRD3Q15059 726 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 MIIPQ5JXC2 388 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 CACNA2D4Q7Z3S7 1137 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 MCF2L2Q86YR7 1114 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 SMAP1Q8IYB5 467 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-205ENST00000472806 KRT222Q8N1A0 295 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 SYT2Q8N9I0 419 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-205ENST00000472806 ACRBPQ8NEB7 543 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 SYN2Q92777 582 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-205ENST00000472806 JAKMIP2Q96AA8 810 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 GMLQ99445 158 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 DEF6Q9H4E7 631 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 MMRN2Q9H8L6 949 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 NHEJ1Q9H9Q4 299 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-205ENST00000472806 METTL14Q9HCE5 456 aaKnown RBP8.42□□□□□ -1.06
CCDC171-205ENST00000472806 MAP3K20Q9NYL2 800 aaKnown RBP8.42□□□□□ -1.06
CCDC171-205ENST00000472806 KCND2Q9NZV8 630 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 DDX41Q9UJV9 622 aaKnown RBP8.42□□□□□ -1.06
CCDC171-205ENST00000472806 PCDHAC2Q9Y5I4 1007 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 UBE4BO95155 1302 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 MYH7BA7E2Y1 1941 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 SSU72P8A0A1W2PR75 194 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CTAGE15A4D2H0 777 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 E9PMD0 336 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 SLC16A3O15427 465 aaKnown RBP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 PPP1R12BO60237 982 aaPredicted RBP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 MED24O75448 989 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 ADH1CP00326 375 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CTAGE8P0CG41 777 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 RPS12P25398 132 aaKnown RBP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CAP2P40123 477 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 GRM5P41594 1212 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 VAV2P52735 878 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 SLC12A3P55017 1021 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CHMP4BP1P59074 171 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 FAM193AP78312 1265 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 ZCWPW2Q504Y3 356 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 TEX35Q5T0J7 233 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CCDC122Q5T0U0 273 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 FAM83BQ5T0W9 1011 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CCDC70Q6NSX1 233 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 FBXO38Q6PIJ6 1188 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 LRRC55Q6ZSA7 311 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 RSRC2Q7L4I2 434 aaKnown RBP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 KCNK18Q7Z418 384 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 FRMD5Q7Z6J6 570 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CTAGE6Q86UF2 777 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CATSPER3Q86XQ3 398 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 FMNL3Q8IVF7 1028 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CTAGE4Q8IX94 777 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 ZC3H3Q8IXZ2 948 aaKnown RBP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 SLC35F6Q8N357 371 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 ZSCAN1Q8NBB4 408 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 JDP2Q8WYK2 163 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 LPAR1Q92633 364 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 IRF7Q92985 503 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 HOOK2Q96ED9 719 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CHP1Q99653 195 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 DEFB129Q9H1M3 183 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 VEZTQ9HBM0 779 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 CEP72Q9P209 647 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 SEL1LQ9UBV2 794 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 PLAGL2Q9UPG8 496 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 TRAF3IP3Q9Y228 551 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 SIK3Q9Y2K2 1263 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 DAAM1Q9Y4D1 1078 aa8.41□□□□□ -1.06
CCDC171-205ENST00000472806 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 V9GYY5 206 aaPredicted RBP8.41□□□□□ -1.06
CCDC171-205ENST00000472806 A0A1W2PRG0 241 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 CLRN2A0PK11 232 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 PDXKO00764 312 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 WDR46O15213 610 aaKnown RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 EIF3DO15371 548 aaKnown RBP eCLIP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 MSH4O15457 936 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 GAS7O60861 476 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 TACC1O75410 805 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 RAD17O75943 681 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ZIC2O95409 532 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 CFBP00751 764 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ANXA13P27216 316 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ARHGAP25P42331 645 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 PRELPP51888 382 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 MAP3K10Q02779 954 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 SPIRE1Q08AE8 756 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 GPS2Q13227 327 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 PPP2R5CQ13362 524 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ADAM9Q13443 819 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ECM1Q16610 540 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 BMT2Q1RMZ1 405 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 SLC9C1Q4G0N8 1177 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 C6orf118Q5T5N4 469 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms