RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 FBXL5Q9UKA1 691 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 ZMYM2Q9UBW7 1377 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 GTPBP10A4D1E9 387 aaKnown RBP20.43■□□□□ 0.86
COL20A1-205ENST00000471582 ITGB5P18084 799 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 GUCY2CP25092 1073 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 MYCT1Q8N699 235 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 PNKPQ96T60 521 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 LXNQ9BS40 222 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 MKNK1Q9BUB5 465 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 SLC38A10Q9HBR0 1119 aa20.43■□□□□ 0.86
COL20A1-205ENST00000471582 DOCK1Q14185 1865 aa20.42■□□□□ 0.86
COL20A1-205ENST00000471582 TGFB1I1O43294 461 aa20.42■□□□□ 0.86
COL20A1-205ENST00000471582 GFPT1Q06210 699 aaPredicted RBP20.42■□□□□ 0.86
COL20A1-205ENST00000471582 DPY19L2P1Q6NXN4 242 aa20.42■□□□□ 0.86
COL20A1-205ENST00000471582 SAMD1Q6SPF0 538 aaPredicted RBP20.42■□□□□ 0.86
COL20A1-205ENST00000471582 SLC30A10Q6XR72 485 aa20.42■□□□□ 0.86
COL20A1-205ENST00000471582 NOA1Q8NC60 698 aaKnown RBP20.42■□□□□ 0.86
COL20A1-205ENST00000471582 GBP3Q9H0R5 595 aa20.42■□□□□ 0.86
COL20A1-205ENST00000471582 CAPN6Q9Y6Q1 641 aa20.42■□□□□ 0.86
COL20A1-205ENST00000471582 NFIBO00712 420 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 PLA2G4AP47712 749 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 EXOC3L4Q17RC7 722 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 LONRF2Q1L5Z9 754 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 NBPF12Q5TAG4 269 aaPredicted RBP20.41■□□□□ 0.86
COL20A1-205ENST00000471582 ANGEL2Q5VTE6 544 aaKnown RBP20.41■□□□□ 0.86
COL20A1-205ENST00000471582 PCNX4Q63HM2 1172 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 IQCEQ6IPM2 695 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 WDR93Q6P2C0 686 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 TRPM4Q8TD43 1214 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 SLC35C1Q96A29 364 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 FIZ1Q96SL8 496 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 FUT8Q9BYC5 575 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 KCNH7Q9NS40 1196 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 COL20A1Q9P218 1284 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 WRAP73Q9P2S5 460 aaPredicted RBP20.41■□□□□ 0.86
COL20A1-205ENST00000471582 SNX12Q9UMY4 172 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 RAPGEF1Q13905 1077 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 ASIC2Q16515 512 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 SLC18A3Q16572 532 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 ZNF720Q7Z2F6 126 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 BORCS6Q96GS4 357 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 MMS19Q96T76 1030 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 UBIAD1Q9Y5Z9 338 aa20.41■□□□□ 0.86
COL20A1-205ENST00000471582 BZW2Q9Y6E2 419 aaKnown RBP20.41■□□□□ 0.86
COL20A1-205ENST00000471582 PPP1R12BO60237 982 aaPredicted RBP20.4■□□□□ 0.86
COL20A1-205ENST00000471582 FDX1P10109 184 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 ANXA13P27216 316 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 KCNA1Q09470 495 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 KLHDC7AQ5VTJ3 777 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 FAM178BQ8IXR5 827 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 GOLGA5Q8TBA6 731 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 NOX5Q96PH1 765 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 UBXN6Q9BZV1 441 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 MLXIPQ9HAP2 919 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 JADE2Q9NQC1 790 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 PPP1R9AQ9ULJ8 1098 aa20.4■□□□□ 0.86
COL20A1-205ENST00000471582 ARHGEF35A5YM69 484 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 SASH3O75995 380 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 RHOXF2BP0C7M4 288 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 UCHL3P15374 230 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 PON1P27169 355 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 NMT1P30419 496 aaKnown RBP20.39■□□□□ 0.86
COL20A1-205ENST00000471582 USP14P54578 494 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 ITIH3Q06033 890 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 KLHL30Q0D2K2 578 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 BEND6Q5SZJ8 279 aaPredicted RBP20.39■□□□□ 0.86
COL20A1-205ENST00000471582 C9orf131Q5VYM1 1079 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 GBP6Q6ZN66 633 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 ZNF572Q7Z3I7 529 aaPredicted RBP20.39■□□□□ 0.86
COL20A1-205ENST00000471582 MSL3Q8N5Y2 521 aaKnown RBP20.39■□□□□ 0.86
COL20A1-205ENST00000471582 RHOXF2Q9BQY4 288 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 BCAS3Q9H6U6 928 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 PCDHB13Q9Y5F0 798 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 PPP2R3BQ9Y5P8 575 aa20.39■□□□□ 0.86
COL20A1-205ENST00000471582 TARSL2A2RTX5 802 aaKnown RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 SFI1A8K8P3 1242 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 ZBTB39O15060 712 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 DHX15O43143 795 aaKnown RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 SRGAP2O75044 1071 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 MOCS3O95396 460 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 P4HBP07237 508 aaKnown RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 TCP1P17987 556 aaKnown RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 MCM3P25205 808 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 PSMC2P35998 433 aaKnown RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 FAM193AP78312 1265 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 TKFCQ3LXA3 575 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 DCAF17Q5H9S7 520 aaPredicted RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 UTP14CQ5TAP6 766 aaKnown RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 HS2ST1Q7LGA3 356 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 MIER3Q7Z3K6 550 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 AS3MTQ9HBK9 375 aa20.39■□□□□ 0.85
COL20A1-205ENST00000471582 AGO4Q9HCK5 861 aaKnown RBP20.39■□□□□ 0.85
COL20A1-205ENST00000471582 MAP2K7O14733 419 aa20.38■□□□□ 0.85
COL20A1-205ENST00000471582 ALAS1P13196 640 aa20.38■□□□□ 0.85
COL20A1-205ENST00000471582 CASP4P49662 377 aa20.38■□□□□ 0.85
COL20A1-205ENST00000471582 APBA1Q02410 837 aa20.38■□□□□ 0.85
COL20A1-205ENST00000471582 DMTNQ08495 405 aa20.38■□□□□ 0.85
COL20A1-205ENST00000471582 ODR4Q5SWX8 454 aa20.38■□□□□ 0.85
COL20A1-205ENST00000471582 C10orf76Q5T2E6 689 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms