RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 ANKEF1Q9NU02 776 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 DDX19AQ9NUU7 478 aaKnown RBP11.8□□□□□ -0.52
SMC1A-206ENST00000470241 ATP11BQ9Y2G3 1177 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 MROH7Q68CQ1 1323 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 KDM3AQ9Y4C1 1321 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 A0A087X0B3 334 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 E9PMD0 336 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 TREHO43280 583 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 C22orf31O95567 290 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 GNAT1P11488 350 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 RARRES1P49788 294 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 FAAP100Q0VG06 881 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 PTGISQ16647 500 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 MTERF2Q49AM1 385 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 XKR9Q5GH70 373 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 CLEC17AQ6ZS10 378 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 OTUD6AQ7L8S5 288 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 CALML4Q96GE6 196 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 CDK5RAP3Q96JB5 506 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 CEP170P1Q96L14 293 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 BLOC1S4Q9NUP1 217 aa11.79□□□□□ -0.52
SMC1A-206ENST00000470241 DBR1Q9UK59 544 aaKnown RBP11.79□□□□□ -0.52
SMC1A-206ENST00000470241 IGKV6-21A0A0C4DH24 114 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 DCDC2CA8MYV0 355 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 CAPN15O75808 1086 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 EYA4O95677 639 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 PLCG1P19174 1290 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 CMA1P23946 247 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 KLRC1P26715 233 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 TXLNAP40222 546 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 RGS19P49795 217 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 NAALADL2Q58DX5 795 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 RUFY4Q6ZNE9 571 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 SERINC5Q86VE9 423 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 LINC01465Q8N7H1 131 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 TMEM87AQ8NBN3 555 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 RASSF8Q8NHQ8 419 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 DHX38Q92620 1227 aaKnown RBP11.78□□□□□ -0.52
SMC1A-206ENST00000470241 WNT8BQ93098 351 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 HTATIP2Q9BUP3 242 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 PANK2Q9BZ23 570 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 NT5C3AQ9H0P0 336 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 BHMT2Q9H2M3 363 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 DHX33Q9H6R0 707 aaKnown RBP11.78□□□□□ -0.52
SMC1A-206ENST00000470241 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 TUBE1Q9UJT0 475 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 PPME1Q9Y570 386 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
SMC1A-206ENST00000470241 TLR3O15455 904 aaKnown RBP11.77□□□□□ -0.53
SMC1A-206ENST00000470241 MAFO75444 373 aaPredicted RBP11.77□□□□□ -0.53
SMC1A-206ENST00000470241 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 CYP2C9P11712 490 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 PTK7Q13308 1070 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
SMC1A-206ENST00000470241 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 TRIM71Q2Q1W2 868 aaKnown RBP11.77□□□□□ -0.53
SMC1A-206ENST00000470241 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 RAD54LQ92698 747 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 GOLPH3LQ9H4A5 285 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 XPNPEP1Q9NQW7 623 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 PDLIM7Q9NR12 457 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 FAM13BQ9NYF5 915 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 NOD1Q9Y239 953 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 HPSEQ9Y251 543 aa11.77□□□□□ -0.53
SMC1A-206ENST00000470241 A0A1B0GVL5 298 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 SMIM35A0A1B0GVV1 85 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 MAGEB2O15479 319 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 GADD45BO75293 160 aaPredicted RBP11.76□□□□□ -0.53
SMC1A-206ENST00000470241 DGAT1O75907 488 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 CLTBP09497 229 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 PFKFB1P16118 471 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 RFC5P40937 340 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 SLC12A3P55017 1021 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 DRP2Q13474 957 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 E2F4Q16254 413 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 TPRNQ4KMQ1 711 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 TAF2Q6P1X5 1199 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 PADI6Q6TGC4 694 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 KIAA0319LQ8IZA0 1049 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 LRRC71Q8N4P6 559 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 PDILTQ8N807 584 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 SYT2Q8N9I0 419 aaPredicted RBP11.76□□□□□ -0.53
SMC1A-206ENST00000470241 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 MRPS27Q92552 414 aaKnown RBP11.76□□□□□ -0.53
SMC1A-206ENST00000470241 RUSC1Q9BVN2 902 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
SMC1A-206ENST00000470241 KCNH3Q9ULD8 1083 aa11.76□□□□□ -0.53
SMC1A-206ENST00000470241 TRIM43BA6NCK2 446 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms