RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 HINFPQ9BQA5 517 aa10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 CELF4Q9BZC1 486 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 C1orf112Q9NSG2 853 aa10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 TYW1Q9NV66 732 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 LIMD1Q9UGP4 676 aa10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 USTQ9Y2C2 406 aa10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 KIAA1671Q9BY89 1806 aa10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 PLXNA4Q9HCM2 1894 aa10.23□□□□□ -0.77
SYNGAP1-205ENST00000470232 STK25O00506 426 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 SEC24BO95487 1268 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 PPM1AP35813 382 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 IGBP1P78318 339 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 MRPS9P82933 396 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 NFX1Q12986 1120 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 HDAC1Q13547 482 aaPredicted RBP10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 IFIT1BQ5T764 474 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 ZC3H14Q6PJT7 736 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 SLC24A5Q71RS6 500 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 CUL5Q93034 780 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 MTMR8Q96EF0 704 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 UBAC1Q9BSL1 405 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 FAM49AQ9H0Q0 323 aaPredicted RBP10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 POMKQ9H5K3 350 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 ATP6V0A4Q9HBG4 840 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 CYP26B1Q9NR63 512 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 DBR1Q9UK59 544 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 FBXL21Q9UKT6 434 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 PCDHA2Q9Y5H9 948 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 IGSF9BQ9UPX0 1349 aa10.22□□□□□ -0.77
SYNGAP1-205ENST00000470232 GPR182O15218 404 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 HOXA2O43364 376 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 KRT37O76014 449 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 ASGR2P07307 311 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 RFX1P22670 979 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 MARK3P27448 753 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 GATMP50440 423 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 KRT76Q01546 638 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 SEMA3FQ13275 785 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 SMC1AQ14683 1233 aaKnown RBP10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 MARCH8Q5T0T0 291 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 HOMER1Q86YM7 354 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 TBC1D10CQ8IV04 446 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 ENAHQ8N8S7 591 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 KRT23Q9C075 422 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 AZI2Q9H6S1 392 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 RGS18Q9NS28 235 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 DZANK1Q9NVP4 752 aa10.21□□□□□ -0.77
SYNGAP1-205ENST00000470232 KDM3AQ9Y4C1 1321 aa10.21□□□□□ -0.78
SYNGAP1-205ENST00000470232 FRYLO94915 3013 aa10.21□□□□□ -0.78
SYNGAP1-205ENST00000470232 EP300Q09472 2414 aaPredicted RBP10.21□□□□□ -0.78
SYNGAP1-205ENST00000470232 PNMA6FA0A0J9YX94 578 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 HIDE1A8MVS5 230 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 PPP1R11O60927 126 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 RPS6KA5O75582 802 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 INSRRP14616 1297 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 NEDD4P46934 1319 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 TMEM62Q0P6H9 643 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 APOBRQ0VD83 1088 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 TDGQ13569 410 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 GSE1Q14687 1217 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 FRMPD4Q14CM0 1322 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 FAM102BQ5T8I3 360 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 SMARCC2Q8TAQ2 1214 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 CYP2W1Q8TAV3 490 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 RUBCNQ92622 972 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 GPRASP2Q96D09 838 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 BORCS6Q96GS4 357 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 FAM227BQ96M60 508 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 ZNF558Q96NG5 402 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 TBC1D32Q96NH3 1257 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 CNTNAP3BQ96NU0 1288 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 ADAM2Q99965 735 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 CNTNAP3Q9BZ76 1288 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 CWH43Q9H720 699 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 ELAC1Q9H777 363 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 CNNM2Q9H8M5 875 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 SPG21Q9NZD8 308 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 ZSWIM5Q9P217 1185 aa10.2□□□□□ -0.78
SYNGAP1-205ENST00000470232 A0A0D9SFI3 127 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 SMIM35A0A1B0GVV1 85 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 GSTTP1A0A1W2PQM5 241 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 CARNS1A5YM72 827 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 B4E1Z4 1266 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 MAFGO15525 162 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 PI15O43692 258 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 EOMESO95936 686 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 CA8P35219 290 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 GIT2Q14161 759 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 RARS2Q5T160 578 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 CWF19L1Q69YN2 538 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 KIAA1841Q6NSI8 718 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 KCNT2Q6UVM3 1135 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 OTOP3Q7RTS5 596 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 ABI1Q8IZP0 508 aa10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 MRPL43Q8N983 215 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-205ENST00000470232 PIGSQ96S52 555 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms