RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 HDAC4P56524 1084 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 MYL6P60660 151 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 SNAPC2Q13487 334 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 DCAF17Q5H9S7 520 aaPredicted RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TMCO4Q5TGY1 634 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ITPRIPL1Q6GPH6 555 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 PNPLA7Q6ZV29 1317 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TMTC3Q6ZXV5 915 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 UNC13DQ70J99 1090 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TEX9Q8N6V9 391 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 LRRC7Q96NW7 1537 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 MKNK1Q9BUB5 465 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 SNX25Q9H3E2 840 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 PDS5AQ29RF7 1337 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TMEM247A6NEH6 219 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 INHBAP08476 426 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT7P08729 469 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ARL4AP40617 200 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC184Q52MB2 194 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TBC1D9BQ66K14 1250 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 FAM117BQ6P1L5 589 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TNIP2Q8NFZ5 429 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ZBTB18Q99592 522 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 THUMPD2Q9BTF0 503 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 STOML1Q9UBI4 398 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 PCDHB8Q9UN66 801 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 SMG5Q9UPR3 1016 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 VPS9D1Q9Y2B5 631 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ABCC3O15438 1527 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ZNF532Q9HCE3 1301 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ORC4O43929 436 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 LONRF3Q496Y0 759 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 OLFML2BQ68BL8 750 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 FOXR2Q6PJQ5 311 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 GPBP1Q86WP2 473 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TTC30AQ86WT1 665 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ABI1Q8IZP0 508 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TSSK1BQ9BXA7 367 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 LSG1Q9H089 658 aaKnown RBP6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TAF1DQ9H5J8 278 aaPredicted RBP6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 C17orf75Q9HAS0 396 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 LZTFL1Q9NQ48 299 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 SCOCQ9UIL1 159 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 DDX41Q9UJV9 622 aaKnown RBP6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ADGRB3O60242 1522 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 SSU72P8A0A1W2PR75 194 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TMEM232C9JQI7 657 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 GCNT3O95395 438 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 MMP1P03956 469 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 RPL22P35268 128 aaKnown RBP6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 MYL7Q01449 175 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TFAP4Q01664 338 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 GOLGA8FQ08AF8 430 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 GOLGA8DPQ0D2H9 430 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 MTHFD1LQ6UB35 978 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 MOXD1Q6UVY6 613 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ST13P4Q8IZP2 240 aaPredicted RBP6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 DEFB118Q96PH6 123 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TSPAN18Q96SJ8 248 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 PIDD1Q9HB75 910 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ANAPC5Q9UJX4 755 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 PPP1R9AQ9ULJ8 1098 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 GINS2Q9Y248 185 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 PNMA6FA0A0J9YX94 578 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 MX2P20592 715 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 OAS2P29728 719 aaKnown RBP6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ARHGDIAP52565 204 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 EFNA5P52803 228 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 PRKAA2P54646 552 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 ZNF174Q15697 407 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 UGP2Q16851 508 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 MUM1Q2TAK8 710 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 TMEM179Q6ZVK1 233 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 PALB2Q86YC2 1186 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC13Q8IYE1 715 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 RASEFQ8IZ41 740 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 GPC2Q8N158 579 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 PNMA1Q8ND90 353 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 SIKE1Q9BRV8 207 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 LSM14BQ9BX40 385 aaKnown RBP6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 NCDNQ9UBB6 729 aa6.59□□□□□ -1.35
CCDC144A-212ENST00000470068 A0A1W2PQJ5 194 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 OPLAHO14841 1288 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 WDR46O15213 610 aaKnown RBP6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 SH3BP5O60239 455 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 GPC4O75487 556 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 TAF5LO75529 589 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 OATP04181 439 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 TMEM191BP0C7N4 346 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 HSPD1P10809 573 aaKnown RBP6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 HOXB8P17481 243 aaPredicted RBP6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 SYN1P17600 705 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 CDH2P19022 906 aaPredicted RBP6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 LRRC8BQ6P9F7 803 aa6.59□□□□□ -1.36
CCDC144A-212ENST00000470068 RNF34Q969K3 372 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms