RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 CD320Q9NPF0 282 aa15.32■□□□□ 0.04
EFNA1-203ENST00000469878 GABBR1Q9UBS5 961 aa15.32■□□□□ 0.04
EFNA1-203ENST00000469878 NOC2LQ9Y3T9 749 aaKnown RBP15.32■□□□□ 0.04
EFNA1-203ENST00000469878 MRPL42Q9Y6G3 142 aaKnown RBP15.32■□□□□ 0.04
EFNA1-203ENST00000469878 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
EFNA1-203ENST00000469878 PLXNA4Q9HCM2 1894 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 H3BQ06 376 aaPredicted RBP15.31■□□□□ 0.04
EFNA1-203ENST00000469878 CHMP2AO43633 222 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 ZNF862O60290 1169 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 BMPR1AP36894 532 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 NPY5RQ15761 445 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 ZNF746Q6NUN9 644 aaPredicted RBP15.31■□□□□ 0.04
EFNA1-203ENST00000469878 CKAP2LQ8IYA6 745 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.31■□□□□ 0.04
EFNA1-203ENST00000469878 OSMRQ99650 979 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 ERVK-5Q9HDB9 667 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 TBC1D22BQ9NU19 505 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 MAFBQ9Y5Q3 323 aaPredicted RBP15.31■□□□□ 0.04
EFNA1-203ENST00000469878 COL1A2P08123 1366 aa15.31■□□□□ 0.04
EFNA1-203ENST00000469878 FNDC1Q4ZHG4 1894 aaPredicted RBP15.31■□□□□ 0.04
EFNA1-203ENST00000469878 BDP1A6H8Y1 2624 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 C5orf67F2Z3F1 127 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 TDP2O95551 362 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 VTNP04004 478 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 IL9P15248 144 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 CLCN3P51790 818 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 NLRP5P59047 1200 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 NFX1Q12986 1120 aaKnown RBP15.3■□□□□ 0.04
EFNA1-203ENST00000469878 PTPROQ16827 1216 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 KIZQ2M2Z5 673 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 TIGD5Q53EQ6 642 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 ZNF484Q5JVG2 852 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 TBCKQ8TEA7 893 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 BBXQ8WY36 941 aaPredicted RBP15.3■□□□□ 0.04
EFNA1-203ENST00000469878 CLP1Q92989 425 aaKnown RBP15.3■□□□□ 0.04
EFNA1-203ENST00000469878 ZNF668Q96K58 619 aaPredicted RBP15.3■□□□□ 0.04
EFNA1-203ENST00000469878 ALG13Q9NP73 1137 aaKnown RBP15.3■□□□□ 0.04
EFNA1-203ENST00000469878 HCSTQ9UBK5 93 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 PCDHA10Q9Y5I2 948 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 SQORQ9Y6N5 450 aa15.3■□□□□ 0.04
EFNA1-203ENST00000469878 M0R2N6 131 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 RPLP2P05387 115 aaKnown RBP15.29■□□□□ 0.04
EFNA1-203ENST00000469878 PSAPP07602 524 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 DNAJB1P25685 340 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 GTF2F1P35269 517 aaKnown RBP eCLIP15.29■□□□□ 0.042e-7■■■■□ 25.7
EFNA1-203ENST00000469878 SSRP1Q08945 709 aaKnown RBP15.29■□□□□ 0.04
EFNA1-203ENST00000469878 CAMK1Q14012 370 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 LEXMQ3ZCV2 418 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 FAM228AQ86W67 206 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 NPAS4Q8IUM7 802 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 SMAP1Q8IYB5 467 aaPredicted RBP15.29■□□□□ 0.04
EFNA1-203ENST00000469878 METTL13Q8N6R0 699 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 SLC5A5Q92911 643 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 TNPO1Q92973 898 aaKnown RBP15.29■□□□□ 0.04
EFNA1-203ENST00000469878 FTHL17Q9BXU8 183 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 UNC45AQ9H3U1 944 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 NSUN3Q9H649 340 aaKnown RBP15.29■□□□□ 0.04
EFNA1-203ENST00000469878 EPHX3Q9H6B9 360 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 GJB4Q9NTQ9 266 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 SAMM50Q9Y512 469 aa15.29■□□□□ 0.04
EFNA1-203ENST00000469878 TMEM150BA6NC51 233 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 GPR32O75388 356 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 PRKCEQ02156 737 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 SCRN1Q12765 414 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 MCTP2Q6DN12 878 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 EP400NLQ6ZTU2 488 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 CMTR2Q8IYT2 770 aaKnown RBP15.28■□□□□ 0.04
EFNA1-203ENST00000469878 NME8Q8N427 588 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 LRRC71Q8N4P6 559 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 LINC01465Q8N7H1 131 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 NEK9Q8TD19 979 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 ZNF274Q96GC6 653 aaPredicted RBP15.28■□□□□ 0.04
EFNA1-203ENST00000469878 TM6SF1Q9BZW5 370 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 SH3GLB2Q9NR46 395 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 DISC1Q9NRI5 854 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 PDRG1Q9NUG6 133 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 TCEAL9Q9UHQ7 104 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 ST3GAL5Q9UNP4 418 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 KCNJ14Q9UNX9 436 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
EFNA1-203ENST00000469878 WDR64B1ANS9 1081 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 LINC01565O15544 149 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 DEXIO95424 95 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 OATP04181 439 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 ITGB1P05556 798 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 COL9A1P20849 921 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 IRS1P35568 1242 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 LTBRP36941 435 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 DLX2Q07687 328 aaPredicted RBP15.27■□□□□ 0.04
EFNA1-203ENST00000469878 HYAL1Q12794 435 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 COL19A1Q14993 1142 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 PTCRAQ6ISU1 281 aaPredicted RBP15.27■□□□□ 0.04
EFNA1-203ENST00000469878 TRIM22Q8IYM9 498 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 BLIDQ8IZY5 108 aa15.27■□□□□ 0.04
EFNA1-203ENST00000469878 ADAM2Q99965 735 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms