RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CAND2O75155 1236 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 YEATS4O95619 227 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 CHRNA1P02708 482 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 SETQ01105 290 aaPredicted RBP19.8■□□□□ 0.76
MRPL28-208ENST00000469744 PLEKHG4Q58EX7 1191 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 ABHD15Q6UXT9 468 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 CCDC60Q8IWA6 550 aaPredicted RBP19.8■□□□□ 0.76
MRPL28-208ENST00000469744 USP38Q8NB14 1042 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 TRIM44Q96DX7 344 aaPredicted RBP19.8■□□□□ 0.76
MRPL28-208ENST00000469744 USP28Q96RU2 1077 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 ZBED2Q9BTP6 218 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 CLSTN2Q9H4D0 955 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 PCDHA4Q9UN74 947 aa19.8■□□□□ 0.76
MRPL28-208ENST00000469744 MYH9P35579 1960 aaKnown RBP19.8■□□□□ 0.76
MRPL28-208ENST00000469744 MBLAC1A4D2B0 266 aaPredicted RBP19.79■□□□□ 0.76
MRPL28-208ENST00000469744 ATG7O95352 703 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 IGFBP4P22692 258 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 CIITAP33076 1130 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 NPY5RQ15761 445 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 TAF2Q6P1X5 1199 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 PLPPR4Q7Z2D5 763 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.79■□□□□ 0.76
MRPL28-208ENST00000469744 PPM1EQ8WY54 764 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 LENG9Q96B70 501 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 FAM49AQ9H0Q0 323 aaPredicted RBP19.79■□□□□ 0.76
MRPL28-208ENST00000469744 GJB4Q9NTQ9 266 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 KCNJ14Q9UNX9 436 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 CUL9Q8IWT3 2517 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 WDR81Q562E7 1941 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 LOXHD1Q8IVV2 1947 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 IGKV6D-21A0A0A0MT36 114 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 POTEB3A0JP26 581 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 KIF28PB7ZC32 967 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 RFXAPO00287 272 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 CCDC192P0DO97 292 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 FOSBP53539 338 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 GUCY1B3Q02153 619 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 TAP1Q03518 808 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 FAM26DQ5JW98 314 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 POTEBQ6S5H4 581 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 BLIDQ8IZY5 108 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 TBCKQ8TEA7 893 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 SEPT8Q92599 483 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 GJA10Q969M2 543 aa19.79■□□□□ 0.76
MRPL28-208ENST00000469744 A0A1W2PQ27 194 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 A0A1W2PQ64 194 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 A0A1W2PQD8 194 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 EPOPA6NHQ4 379 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 EFCAB14O75071 495 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 GHRP10912 638 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 MKRN4PQ13434 485 aaPredicted RBP19.78■□□□□ 0.76
MRPL28-208ENST00000469744 FAM160B1Q5W0V3 765 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 SWSAP1Q6NVH7 229 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 TRMT1LQ7Z2T5 733 aaKnown RBP19.78■□□□□ 0.76
MRPL28-208ENST00000469744 MYOCDQ8IZQ8 938 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 KCNG4Q8TDN1 519 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 ZNF302Q9NR11 478 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 DACT1Q9NYF0 836 aa19.78■□□□□ 0.76
MRPL28-208ENST00000469744 RRN3P2A6NIE6 340 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 M0R2N6 131 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 GJB5O95377 273 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 MGAT3Q09327 533 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 TMEM62Q0P6H9 643 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 TRIM29Q14134 588 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 MIS18BP1Q6P0N0 1132 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 PDXDC2PQ6P474 469 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 RSPH3Q86UC2 560 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 ARNTL2Q8WYA1 636 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 IFIH1Q9BYX4 1025 aaKnown RBP19.77■□□□□ 0.76
MRPL28-208ENST00000469744 TNMDQ9H2S6 317 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 TBC1D22BQ9NU19 505 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 CDY2AQ9Y6F7 541 aa19.77■□□□□ 0.76
MRPL28-208ENST00000469744 EVPLQ92817 2033 aa19.77■□□□□ 0.75
MRPL28-208ENST00000469744 MSH4O15457 936 aa19.76■□□□□ 0.75
MRPL28-208ENST00000469744 TDP2O95551 362 aa19.76■□□□□ 0.75
MRPL28-208ENST00000469744 CCDC85BQ15834 202 aaPredicted RBP19.76■□□□□ 0.75
MRPL28-208ENST00000469744 KRT40Q6A162 431 aa19.76■□□□□ 0.75
MRPL28-208ENST00000469744 RPAINQ86UA6 219 aa19.76■□□□□ 0.75
MRPL28-208ENST00000469744 DAGLBQ8NCG7 672 aa19.76■□□□□ 0.75
MRPL28-208ENST00000469744 TCEAL9Q9UHQ7 104 aa19.76■□□□□ 0.75
MRPL28-208ENST00000469744 COL4A4P53420 1690 aaPredicted RBP19.76■□□□□ 0.75
MRPL28-208ENST00000469744 PRRC2BQ5JSZ5 2229 aaKnown RBP19.76■□□□□ 0.75
MRPL28-208ENST00000469744 CHMP2AO43633 222 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 AMHP03971 560 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 ATP4AP20648 1035 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 SLC26A2P50443 739 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 USP11P51784 963 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 MRPS6P82932 125 aaKnown RBP19.75■□□□□ 0.75
MRPL28-208ENST00000469744 KRT76Q01546 638 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 LPIN1Q14693 890 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 ADALQ6DHV7 355 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 ZNF746Q6NUN9 644 aaPredicted RBP19.75■□□□□ 0.75
MRPL28-208ENST00000469744 CKAP2LQ8IYA6 745 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 MICALL1Q8N3F8 863 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 LINC00301Q8NCQ3 95 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 ATP8B4Q8TF62 1192 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 PRDM6Q9NQX0 595 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 SAMM50Q9Y512 469 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 VCANP13611 3396 aa19.75■□□□□ 0.75
MRPL28-208ENST00000469744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms