RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 XKR3Q5GH77 459 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 OTOP2Q7RTS6 562 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 RPUSD2Q8IZ73 545 aaKnown RBP12.34□□□□□ -0.43
SNU13-206ENST00000469028 LINC01465Q8N7H1 131 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 HERVK_113Q902F9 699 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
SNU13-206ENST00000469028 HSD17B14Q9BPX1 270 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
SNU13-206ENST00000469028 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 CEP131Q9UPN4 1083 aa12.34□□□□□ -0.43
SNU13-206ENST00000469028 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
SNU13-206ENST00000469028 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNU13-206ENST00000469028 CLCN3P51790 818 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.44
SNU13-206ENST00000469028 ATP2C1P98194 919 aaPredicted RBP12.33□□□□□ -0.44
SNU13-206ENST00000469028 TMEM62Q0P6H9 643 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 MTERF2Q49AM1 385 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 FAM173BQ6P4H8 233 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 BRAPQ7Z569 592 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 C4orf19Q8IY42 314 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 KIAA0319LQ8IZA0 1049 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
SNU13-206ENST00000469028 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 LRCH3Q96II8 777 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 FTOQ9C0B1 505 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNU13-206ENST00000469028 CDY2AQ9Y6F7 541 aa12.33□□□□□ -0.44
SNU13-206ENST00000469028 LAMA2P24043 3122 aaKnown RBP12.33□□□□□ -0.44
SNU13-206ENST00000469028 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 ZBTB39O15060 712 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 STX6O43752 255 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 DKC1O60832 514 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNU13-206ENST00000469028 MED24O75448 989 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 SPATA31C1P0DKV0 1188 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 NPEPPSP55786 919 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 DRP2Q13474 957 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
SNU13-206ENST00000469028 CNKSR3Q6P9H4 555 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 RSPH3Q86UC2 560 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 TPH2Q8IWU9 490 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 LRRC71Q8N4P6 559 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 NEK9Q8TD19 979 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
SNU13-206ENST00000469028 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 LAD1O00515 517 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 MAGEB2O15479 319 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 LYPLA2O95372 231 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 VTNP04004 478 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 RPLP2P05387 115 aaKnown RBP12.31□□□□□ -0.44
SNU13-206ENST00000469028 GHRP10912 638 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
SNU13-206ENST00000469028 PRPHP41219 470 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 TBC1D8BQ0IIM8 1120 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
SNU13-206ENST00000469028 LPIN1Q14693 890 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 TMEM266Q2M3C6 531 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 PLEKHG4Q58EX7 1191 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 FBXO47Q5MNV8 452 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 EFCAB12Q6NXP0 572 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 NME8Q8N427 588 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 METTL13Q8N6R0 699 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 IGSF22Q8N9C0 903 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 DBF4BQ8NFT6 615 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 PPP1R16BQ96T49 567 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 CYP26B1Q9NR63 512 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 KDM3AQ9Y4C1 1321 aa12.31□□□□□ -0.44
SNU13-206ENST00000469028 EVPLQ92817 2033 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 A0A087WWV3 80 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 PP2D1A8MPX8 630 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 ZBBXA8MT70 800 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 GRXCR1A8MXD5 290 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 MAFO75444 373 aaPredicted RBP12.3□□□□□ -0.44
SNU13-206ENST00000469028 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
SNU13-206ENST00000469028 ACTN1P12814 892 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 PKP1Q13835 747 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
SNU13-206ENST00000469028 ECM1Q16610 540 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 IER5Q5VY09 327 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 TMEM40Q8WWA1 233 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 CEP170P1Q96L14 293 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
SNU13-206ENST00000469028 CELF4Q9BZC1 486 aaKnown RBP12.3□□□□□ -0.44
SNU13-206ENST00000469028 AGO3Q9H9G7 860 aaKnown RBP12.3□□□□□ -0.44
SNU13-206ENST00000469028 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 TUFT1Q9NNX1 390 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 LRWD1Q9UFC0 647 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 PTPRSQ13332 1948 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 SZT2Q5T011 3432 aa12.3□□□□□ -0.44
SNU13-206ENST00000469028 M0QZ92 97 aa12.29□□□□□ -0.44
SNU13-206ENST00000469028 GPR32O75388 356 aa12.29□□□□□ -0.44
SNU13-206ENST00000469028 BAIAP3O94812 1187 aa12.29□□□□□ -0.44
SNU13-206ENST00000469028 RPA1P27694 616 aa12.29□□□□□ -0.44
SNU13-206ENST00000469028 CDC25AP30304 524 aa12.29□□□□□ -0.44
SNU13-206ENST00000469028 RARRES1P49788 294 aa12.29□□□□□ -0.44
SNU13-206ENST00000469028 WDR5P61964 334 aaKnown RBP12.29□□□□□ -0.44
SNU13-206ENST00000469028 DEFB103AP81534 67 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms