RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PCDH18Q9HCL0 1135 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 SLC5A4Q9NY91 659 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 IL1RAPL1Q9NZN1 696 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 PDP2Q9P2J9 529 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 GABBR1Q9UBS5 961 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 CEP131Q9UPN4 1083 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 LRRC42Q9Y546 428 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ASB3Q9Y575 518 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 CRYBG1Q9Y4K1 1723 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 EME2A4GXA9 379 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 LINC01387J3KSC0 135 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 DLL1O00548 723 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 TNFRSF10BO14763 440 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 HIP1RO75146 1068 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 PPP6R2O75170 966 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 EIF2S1P05198 315 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 RPSAP08865 295 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 GLB1P16278 677 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 TCP1P17987 556 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 HSD3B2P26439 372 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 PAFAH1B1P43034 410 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 CTCFP49711 727 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 SERPINB8P50452 374 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 KLC1Q07866 573 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 MYO1EQ12965 1108 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 MTMR3Q13615 1198 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 BYSLQ13895 437 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 SPIDRQ14159 915 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 MAP7Q14244 749 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 RRS1Q15050 365 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 THEMIS2Q5TEJ8 643 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 IRGCQ6NXR0 463 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 PDILTQ8N807 584 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 SMC1BQ8NDV3 1235 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ACRBPQ8NEB7 543 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ERMNQ8TAM6 284 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 FBF1Q8TES7 1133 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 TEKT4Q8WW24 435 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ATRIPQ8WXE1 791 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 MAP4K1Q92918 833 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 RNF34Q969K3 372 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ZNF653Q96CK0 615 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 LRRC45Q96CN5 670 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 HVCN1Q96D96 273 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 NAF1Q96HR8 494 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ATP6V1G3Q96LB4 118 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 TCHPQ9BT92 498 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 AKTIPQ9H8T0 292 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 METTL5Q9NRN9 209 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 BAIAP2L1Q9UHR4 511 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 SCOCQ9UIL1 159 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 TMED5Q9Y3A6 229 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 SAMM50Q9Y512 469 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ADAMTS12P58397 1594 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ATP10BO94823 1461 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 CASZ1Q86V15 1759 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 KAT6BQ8WYB5 2073 aa5.32□□□□□ -1.56
SF3B1-207ENST00000468925 ANKARQ7Z5J8 1434 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 TET3O43151 1660 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 PREX2Q70Z35 1606 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 ADGRB1O14514 1584 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 CCT8L1PA6NM43 557 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 GOLGA8AA7E2F4 631 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 BTBD19C9JJ37 291 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 E7EVH7 732 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 ZBTB39O15060 712 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 WDR46O15213 610 aaKnown RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 FANCGO15287 622 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 TRAPPC3O43617 180 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 HNRNPCL1O60812 293 aaKnown RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 TRIM37O94972 964 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 EGFRP00533 1210 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 MYL1P05976 194 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 ACADSP16219 412 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 CALB2P22676 271 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 RPL13P26373 211 aaKnown RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 KRT9P35527 623 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 ZAP70P43403 619 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 EIF3BP55884 814 aaKnown RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 ARHGAP4P98171 946 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 NR1I3Q14994 352 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 STK38Q15208 465 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 PPP1R7Q15435 360 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 GSTA3Q16772 222 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 DPCR1Q3MIW9 517 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 Q4G0T1 1027 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 TOGARAM2Q6ZUX3 1019 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 RSPH3Q86UC2 560 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 FAM228AQ86W67 206 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 SLC35F6Q8N357 371 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 FBXL16Q8N461 479 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 CCDC197Q8NCU1 140 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 OTUD7AQ8TE49 926 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 NOC3LQ8WTT2 800 aaKnown RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 CCT6BQ92526 530 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 TBC1D5Q92609 795 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 TTC9Q92623 222 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 BRF1Q92994 677 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms