RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 SFI1A8K8P3 1242 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 IDEP14735 1019 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 CCNE1P24864 410 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 GUCY2CP25092 1073 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 CAP1Q01518 475 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 NR1I3Q14994 352 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 GNPTABQ3T906 1256 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 SFR1Q86XK3 245 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 ZC3H3Q8IXZ2 948 aaKnown RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 ATL2Q8NHH9 583 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 PIK3R5Q8WYR1 880 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 RBM47A0AV96 593 aaKnown RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 STRNO43815 780 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 SUPT20HL2P0C7V6 817 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 MYBP10242 640 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 TGFB3P10600 412 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 PBX1P40424 430 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 KCNA1Q09470 495 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 UTP14CQ5TAP6 766 aaKnown RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 PLA2G4FQ68DD2 849 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 LRRC55Q6ZSA7 311 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 ARMCX2Q7L311 632 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 IKZF4Q9H2S9 585 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 GABBR1Q9UBS5 961 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 LIMA1Q9UHB6 759 aaKnown RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 ADCY6O43306 1168 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 TLR2O60603 784 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 NPEPPSP55786 919 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 CCNA1P78396 465 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 FAM26FQ5R3K3 315 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 SWSAP1Q6NVH7 229 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 COPS5Q92905 334 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 PDCL3Q9H2J4 239 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 OLFML3Q9NRN5 406 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 FLRT1Q9NZU1 646 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 KCND2Q9NZV8 630 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 SAMM50Q9Y512 469 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 TMEM88BA6NKF7 163 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 PPP1R37O75864 691 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 ARID5BQ14865 1188 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 BMT2Q1RMZ1 405 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 HSDL1Q3SXM5 330 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 HERC4Q5GLZ8 1057 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-208ENST00000468300 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 CELF3Q5SZQ8 465 aaKnown RBP9.15□□□□□ -0.94
BRCA1-208ENST00000468300 FOXR2Q6PJQ5 311 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 PADI6Q6TGC4 694 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 CCDC65Q8IXS2 484 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 NME8Q8N427 588 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 SPC24Q8NBT2 197 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 MAML3Q96JK9 1138 aa9.15□□□□□ -0.94
BRCA1-208ENST00000468300 TEX33O43247 280 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 CRHR2Q13324 411 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 KRT31Q15323 416 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 HS1BP3Q53T59 392 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 WDR78Q5VTH9 848 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 CEP120Q8N960 986 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 AFAP1L1Q8TED9 768 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 EEF2KMTQ96G04 330 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 GPR20Q99678 358 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 ANKEF1Q9NU02 776 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 HIP1RO75146 1068 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 KIF4AO95239 1232 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 PSAPP07602 524 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 METTL7BQ6UX53 244 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 GET4Q7L5D6 327 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-208ENST00000468300 PLEKHH3Q7Z736 793 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 OTUD6BQ8N6M0 293 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 ZNF507Q8TCN5 953 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 GTPBP4Q9BZE4 634 aaKnown RBP9.14□□□□□ -0.95
BRCA1-208ENST00000468300 THAP9Q9H5L6 903 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 GJD2Q9UKL4 321 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 ODF2LQ9ULJ1 636 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 DIS3Q9Y2L1 958 aaKnown RBP9.14□□□□□ -0.95
BRCA1-208ENST00000468300 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-208ENST00000468300 ZBTB42B2RXF5 422 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 PSMA7O14818 248 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 TOMM70O94826 608 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 GGPS1O95749 300 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 NMT1P30419 496 aaKnown RBP9.14□□□□□ -0.95
BRCA1-208ENST00000468300 MAPK4P31152 587 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 UBASH3AP57075 661 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 SP4Q02446 784 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 TBX2Q13207 712 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-208ENST00000468300 MYBPC2Q14324 1141 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 MIIPQ5JXC2 388 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 CYP4F22Q6NT55 531 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
BRCA1-208ENST00000468300 GPRC5CQ9NQ84 441 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 XPNPEP1Q9NQW7 623 aa9.14□□□□□ -0.95
BRCA1-208ENST00000468300 SLC15A5A6NIM6 579 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 KCNJ18B7U540 433 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 TGFB1I1O43294 461 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 LGR5O75473 907 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 INHBEP58166 350 aa9.13□□□□□ -0.95
BRCA1-208ENST00000468300 PRKCEQ02156 737 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms