RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
DDX56-208ENST00000467318 DBR1Q9UK59 544 aaKnown RBP16.45■□□□□ 0.22
DDX56-208ENST00000467318 TRPC6Q9Y210 931 aa16.45■□□□□ 0.22
DDX56-208ENST00000467318 PPME1Q9Y570 386 aa16.45■□□□□ 0.22
DDX56-208ENST00000467318 KIAA0100Q14667 2235 aaKnown RBP16.45■□□□□ 0.22
DDX56-208ENST00000467318 A0A1W2PQ45 241 aaPredicted RBP16.44■□□□□ 0.22
DDX56-208ENST00000467318 A0A1W2PQY0 241 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 STBD1O95210 358 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 EYA4O95677 639 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 TRMT1LQ7Z2T5 733 aaKnown RBP16.44■□□□□ 0.22
DDX56-208ENST00000467318 PIGOQ8TEQ8 1089 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 VTI1AQ96AJ9 217 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 PLIN2Q99541 437 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 STARD7Q9NQZ5 370 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 SEPT9Q9UHD8 586 aaPredicted RBP16.44■□□□□ 0.22
DDX56-208ENST00000467318 NRCAMQ92823 1304 aa16.44■□□□□ 0.22
DDX56-208ENST00000467318 A0A087X0B3 334 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 PSMC6P62333 389 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 E2F4Q16254 413 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 ZNF484Q5JVG2 852 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 NFRKBQ6P4R8 1299 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 EXOC8Q8IYI6 725 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 LARP4BQ92615 738 aaKnown RBP16.43■□□□□ 0.22
DDX56-208ENST00000467318 CCDC43Q96MW1 224 aaKnown RBP16.43■□□□□ 0.22
DDX56-208ENST00000467318 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 MAGEF1Q9HAY2 307 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 SCN10AQ9Y5Y9 1956 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 MKI67P46013 3256 aaKnown RBP16.43■□□□□ 0.22
DDX56-208ENST00000467318 RRN3P2A6NIE6 340 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 E9PMD0 336 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 ZBTB39O15060 712 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 ZNF202O95125 648 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 GNAT1P11488 350 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 INSRRP14616 1297 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 RARRES1P49788 294 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 NAALADL2Q58DX5 795 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 KCNK18Q7Z418 384 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 SESTD1Q86VW0 696 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 CEP57L1Q8IYX8 460 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 FMR1NBQ8N0W7 255 aaPredicted RBP16.43■□□□□ 0.22
DDX56-208ENST00000467318 C7orf31Q8N865 590 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 SYT2Q8N9I0 419 aaPredicted RBP16.43■□□□□ 0.22
DDX56-208ENST00000467318 ENGASEQ8NFI3 743 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 RAD54LQ92698 747 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 DHX58Q96C10 678 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 CCDC34Q96HJ3 373 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 CEP170P1Q96L14 293 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 CYP26B1Q9NR63 512 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 BLOC1S4Q9NUP1 217 aa16.43■□□□□ 0.22
DDX56-208ENST00000467318 COL1A2P08123 1366 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 SLFN14P0C7P3 912 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 PLA2G4BP0C869 781 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
DDX56-208ENST00000467318 CHMP4BP1P59074 171 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 PTPN11Q06124 597 aaPredicted RBP16.42■□□□□ 0.22
DDX56-208ENST00000467318 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
DDX56-208ENST00000467318 ITGA7Q13683 1181 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 TARBP2Q15633 366 aaKnown RBP16.42■□□□□ 0.22
DDX56-208ENST00000467318 NBPF20Q3BBV1 942 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 XKR9Q5GH70 373 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 KCND2Q9NZV8 630 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
DDX56-208ENST00000467318 A0A0U1RQG5 324 aaPredicted RBP16.41■□□□□ 0.22
DDX56-208ENST00000467318 ARHGEF35A5YM69 484 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 AMPD3Q01432 767 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 MTERF2Q49AM1 385 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 KANK3Q6NY19 840 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 SV2BQ7L1I2 683 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 ABHD8Q96I13 439 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 TIGD1Q96MW7 591 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 JPH2Q9BR39 696 aaPredicted RBP16.41■□□□□ 0.22
DDX56-208ENST00000467318 LRRC27Q9C0I9 530 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 LOXHD1Q8IVV2 1947 aa16.41■□□□□ 0.22
DDX56-208ENST00000467318 A0A087WWV3 80 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 NR1I2O75469 434 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 DGAT1O75907 488 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 COL6A1P12109 1028 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 LIG1P18858 919 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 HOXC8P31273 242 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 NPEPPSP55786 919 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 GRIK4Q16099 956 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 LONRF3Q496Y0 759 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 PLA2G4FQ68DD2 849 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 SLC43A3Q8NBI5 491 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 LRRC15Q8TF66 581 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 SLC7A3Q8WY07 619 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 SENP6Q9GZR1 1112 aaPredicted RBP16.4■□□□□ 0.22
DDX56-208ENST00000467318 TNMDQ9H2S6 317 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 HDAC6Q9UBN7 1215 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 GTF2IRD1Q9UHL9 959 aa16.4■□□□□ 0.22
DDX56-208ENST00000467318 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms