RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CCNA1P78396 465 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 CCDC174Q6PII3 467 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 GPR142Q7Z601 462 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 ZFPM1Q8IX07 1006 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 LPIN2Q92539 896 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 EDC3Q96F86 508 aaKnown RBP6.71□□□□□ -1.34
PTCD3-207ENST00000467273 SNX27Q96L92 541 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 SRCIN1Q9C0H9 1055 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 PIDD1Q9HB75 910 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 PRDM7Q9NQW5 492 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 GINM1Q9NU53 330 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 C9orf78Q9NZ63 289 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-207ENST00000467273 LMCD1Q9NZU5 365 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 ATP11BQ9Y2G3 1177 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 ZNF503-AS2A6NEH8 195 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 DDTLA6NHG4 134 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 SLC15A5A6NIM6 579 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 KIAA0355O15063 1070 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 TSPAN15O95858 294 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 ZSCAN22P10073 491 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 PRDX5P30044 214 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 BACE1P56817 501 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 CCL14Q16627 93 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 RABL6Q3YEC7 729 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 TMEM31Q5JXX7 168 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 TIFAQ96CG3 184 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 PPP1R16BQ96T49 567 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 TRIM56Q9BRZ2 755 aaKnown RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 LRFN3Q9BTN0 628 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 PUS3Q9BZE2 481 aaKnown RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 PRDM5Q9NQX1 630 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 GNL3LQ9NVN8 582 aaKnown RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 TMOD4Q9NZQ9 345 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 HERC5Q9UII4 1024 aaKnown RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 ZNF236Q9UL36 1845 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 REV3LO60673 3130 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 IL16Q14005 1332 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 PDS5AQ29RF7 1337 aaKnown RBP6.7□□□□□ -1.34
PTCD3-207ENST00000467273 MYH2Q9UKX2 1941 aa6.7□□□□□ -1.34
PTCD3-207ENST00000467273 MUC6Q6W4X9 2439 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 APAF1O14727 1248 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 CEACAM5P06731 702 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 ASNSP08243 561 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 SLC5A1P13866 664 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 ITIH2P19823 946 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 CNGA1P29973 690 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 BUD31P41223 144 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-207ENST00000467273 FPGSQ05932 587 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 SPRED3Q2MJR0 410 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 TRIM60Q495X7 471 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 NAALADL2Q58DX5 795 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 SLC23A3Q6PIS1 610 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 C1QL4Q86Z23 238 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 LIN37Q96GY3 246 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-207ENST00000467273 P2RX7Q99572 595 aaKnown RBP6.69□□□□□ -1.34
PTCD3-207ENST00000467273 PORCNQ9H237 461 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTCD3-207ENST00000467273 CWC22Q9HCG8 908 aaKnown RBP6.69□□□□□ -1.34
PTCD3-207ENST00000467273 TXNRD2Q9NNW7 524 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 CHD7Q9P2D1 2997 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 RBPJLQ9UBG7 517 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 DENND2AQ9ULE3 1009 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 RABGAP1Q9Y3P9 1069 aa6.69□□□□□ -1.34
PTCD3-207ENST00000467273 TRIM43BA6NCK2 446 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 SEPT4O43236 478 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 STRNO43815 780 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 CLTBP09497 229 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 CYBAP13498 195 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 RAG1P15918 1043 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 GRIA4P48058 902 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 GRB14Q14449 540 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 RAB30Q15771 203 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 LRRC24Q50LG9 513 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 ZNF394Q53GI3 561 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 OLFML2BQ68BL8 750 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 SPTY2D1Q68D10 685 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-207ENST00000467273 LBX2Q6XYB7 198 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 C3orf58Q8NDZ4 430 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 TRIM43Q96BQ3 446 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-207ENST00000467273 TCF12Q99081 682 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 TGIF2Q9GZN2 237 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 KCNH6Q9H252 994 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 LIN7BQ9HAP6 207 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 PPP4R2Q9NY27 417 aa6.68□□□□□ -1.34
PTCD3-207ENST00000467273 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 ERC2O15083 957 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 LEFTY1O75610 366 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 GSTT1P30711 240 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 TLE2Q04725 743 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 GJC2Q5T442 439 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 SYDE1Q6ZW31 735 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 ANKRD33Q7Z3H0 272 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 CCDC84Q86UT8 332 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 TICAM2Q86XR7 235 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 DZIP1Q86YF9 867 aaKnown RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 HERVK_113Q902F9 699 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms