RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 HSPA6P17066 643 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 LMNB1P20700 586 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 GBP1P32455 592 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 PSMC2P35998 433 aaKnown RBP7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SLC16A2P36021 539 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SCNN1DP51172 638 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 HSD17B4P51659 736 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 PRELPP51888 382 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 NUBP1P53384 320 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 EIF6P56537 245 aaKnown RBP7.5□□□□□ -1.21
CDHR3-204ENST00000466351 POLR2FP61218 127 aaKnown RBP7.5□□□□□ -1.21
CDHR3-204ENST00000466351 CYP27A1Q02318 531 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 USP17L24Q0WX57 530 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 CUL1Q13616 776 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 RASA3Q14644 834 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 EPHA7Q15375 998 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 ZSCAN26Q16670 478 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 XRRA1Q6P2D8 792 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 USP17L6PQ6QN14 398 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 POTEGQ6S5H5 508 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 POTEEQ6S8J3 1075 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SH3BP5LQ7L8J4 393 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SLFN11Q7Z7L1 901 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SFR1Q86XK3 245 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 COL23A1Q86Y22 540 aaPredicted RBP7.5□□□□□ -1.21
CDHR3-204ENST00000466351 RDM1Q8NG50 284 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 AFAP1L1Q8TED9 768 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 LPAR1Q92633 364 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SLC35C1Q96A29 364 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 BORCS6Q96GS4 357 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SPAG5Q96R06 1193 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 NAP1L3Q99457 506 aaPredicted RBP7.5□□□□□ -1.21
CDHR3-204ENST00000466351 EIF2AK1Q9BQI3 630 aaKnown RBP7.5□□□□□ -1.21
CDHR3-204ENST00000466351 STRA6Q9BX79 667 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SLITRK6Q9H5Y7 841 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 ZSWIM4Q9H7M6 989 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 VCPKMTQ9H867 229 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 PARVGQ9HBI0 331 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 GDF3Q9NR23 364 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 DMAC2Q9NW81 257 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 DBR1Q9UK59 544 aaKnown RBP7.5□□□□□ -1.21
CDHR3-204ENST00000466351 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 PCDHB13Q9Y5F0 798 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 RPTORQ8N122 1335 aa7.5□□□□□ -1.21
CDHR3-204ENST00000466351 LRRIQ3A6PVS8 624 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 FAM86B1E9PN63 330 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 GCOM1H8Y6P7 765 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 TULP2O00295 520 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 PDE2AO00408 941 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 MEIS1O00470 390 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 GALR2O43603 387 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 RNF40O75150 1001 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 FAM13AO94988 1023 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 MOCS3O95396 460 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 SSBP05455 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 ASNSP08243 561 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 PLEKP08567 350 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 FAM86B2P0C5J1 330 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 POLR2MP0CAP2 368 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 MYBP10242 640 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 PON1P27169 355 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 RAPGEF1Q13905 1077 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 TNIP1Q15025 636 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 KIAA0753Q2KHM9 967 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 CEP55Q53EZ4 464 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 FAM182BQ5T319 152 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 LRCH2Q5VUJ6 765 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 ZNF772Q68DY9 489 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 RINT1Q6NUQ1 792 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 LRIG3Q6UXM1 1119 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 C1orf186Q6ZWK4 172 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 OTOP1Q7RTM1 612 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 IRF2BP2Q7Z5L9 587 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 SLC51AQ86UW1 340 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 SPATS2Q86XZ4 545 aaKnown RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 MCF2L2Q86YR7 1114 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 CLEC10AQ8IUN9 316 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 EFCAB13Q8IY85 973 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 RTKN2Q8IZC4 609 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 RASGEF1CQ8N431 466 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 LRRC57Q8N9N7 239 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 AGBL3Q8NEM8 1001 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 MORC4Q8TE76 937 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 TAF4BQ92750 862 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 HPS3Q969F9 1004 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 CCDC102AQ96A19 550 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 FAM81BQ96LP2 452 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 CSRNP1Q96S65 589 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 GMLQ99445 158 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 EPC1Q9H2F5 836 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 TMEM206Q9H813 350 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 ST7Q9NRC1 585 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 VPS18Q9P253 973 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 LARSQ9P2J5 1176 aaKnown RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 SUCLA2Q9P2R7 463 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-204ENST00000466351 HDAC6Q9UBN7 1215 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 NAGPAQ9UK23 515 aa7.49□□□□□ -1.21
CDHR3-204ENST00000466351 MYH9P35579 1960 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms