RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 SLC9A2Q9UBY0 812 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 CPA4Q9UI42 421 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 PRDM4Q9UKN5 801 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 MRVI1Q9Y6F6 885 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 PVALEFA0A1B0GWK0 134 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 GTPBP6O43824 516 aaPredicted RBP6.71□□□□□ -1.34
CHMP3-206ENST00000466032 ATG7O95352 703 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 HSPA6P17066 643 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 LIG1P18858 919 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 QARSP47897 775 aaKnown RBP6.71□□□□□ -1.34
CHMP3-206ENST00000466032 PSMC5P62195 406 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 LACTBP83111 547 aaPredicted RBP6.71□□□□□ -1.34
CHMP3-206ENST00000466032 CNTN2Q02246 1040 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 SPIRE1Q08AE8 756 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 PSMD2Q13200 908 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 POSTNQ15063 836 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 TMEM119Q4V9L6 283 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 NT5DC1Q5TFE4 455 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 MFSD14CQ5VZR4 134 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 FAM160B1Q5W0V3 765 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 LRSAM1Q6UWE0 723 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 METTL7BQ6UX53 244 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 ARMCX2Q7L311 632 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 C4orf19Q8IY42 314 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 USP6NLQ92738 828 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 DDX27Q96GQ7 796 aaKnown RBP6.71□□□□□ -1.34
CHMP3-206ENST00000466032 EPSTI1Q96J88 318 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 FAM167AQ96KS9 214 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 SPSB2Q99619 263 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 HSD17B14Q9BPX1 270 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 EIF2AK1Q9BQI3 630 aaKnown RBP6.71□□□□□ -1.34
CHMP3-206ENST00000466032 JPH2Q9BR39 696 aaPredicted RBP6.71□□□□□ -1.34
CHMP3-206ENST00000466032 KRTAP4-11Q9BYQ6 195 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 GOLPH3LQ9H4A5 285 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 MLXIPQ9HAP2 919 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 KBTBD4Q9NVX7 518 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 ANO10Q9NW15 660 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 RNF186Q9NXI6 227 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 VAV3Q9UKW4 847 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 SAMM50Q9Y512 469 aa6.71□□□□□ -1.34
CHMP3-206ENST00000466032 NOP56O00567 594 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 CAPN5O15484 640 aaPredicted RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 DHX15O43143 795 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 GAS2O43903 313 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 MSCO60682 206 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 KPNA6O60684 536 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 FKTNO75072 461 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 PPFIA4O75335 1185 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 EYA4O95677 639 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 GH1P01241 217 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 PGK2P07205 417 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 ARP10275 920 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 KCNA2P16389 499 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 PSMC4P43686 418 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 UBXN2AP68543 259 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 GRM1Q13255 1194 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 STIM1Q13586 685 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 KCNB1Q14721 858 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 E2F4Q16254 413 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 IL17AQ16552 155 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 ZSCAN23Q3MJ62 389 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 LONRF3Q496Y0 759 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 DUSP28Q4G0W2 176 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 NCAPH2Q6IBW4 605 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SH3RF1Q7Z6J0 888 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 CATSPER3Q86XQ3 398 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SCUBE3Q8IX30 993 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 DHX37Q8IY37 1157 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 GPR161Q8N6U8 529 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SYT2Q8N9I0 419 aaPredicted RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 MLKLQ8NB16 471 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 CYP2W1Q8TAV3 490 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SPATA20Q8TB22 786 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 PXYLP1Q8TE99 480 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 AFAP1L1Q8TED9 768 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SEPT1Q8WYJ6 367 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 RAD54LQ92698 747 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SMARCE1Q969G3 411 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 DHX58Q96C10 678 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 CCDC43Q96MW1 224 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 C7orf25Q9BPX7 421 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 REPIN1Q9BWE0 567 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 AZI2Q9H6S1 392 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SPC25Q9HBM1 224 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 NRBP2Q9NSY0 501 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 ANKEF1Q9NU02 776 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 TMEM63CQ9P1W3 806 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SEL1LQ9UBV2 794 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 TUBE1Q9UJT0 475 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 DDX41Q9UJV9 622 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 DBR1Q9UK59 544 aaKnown RBP6.7□□□□□ -1.34
CHMP3-206ENST00000466032 GJD2Q9UKL4 321 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 SMCHD1A6NHR9 2005 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 CEP350Q5VT06 3117 aa6.7□□□□□ -1.34
CHMP3-206ENST00000466032 ARID1BQ8NFD5 2236 aaPredicted RBP6.69□□□□□ -1.34
CHMP3-206ENST00000466032 THSD7BQ9C0I4 1608 aa6.69□□□□□ -1.34
CHMP3-206ENST00000466032 FSD2A1L4K1 749 aa6.69□□□□□ -1.34
CHMP3-206ENST00000466032 GPR25O00155 361 aa6.69□□□□□ -1.34
CHMP3-206ENST00000466032 ZEB2O60315 1214 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms