RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 PBX4Q9BYU1 374 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 MAF1Q9H063 256 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 MTIF3Q9H2K0 278 aaKnown RBP10.75□□□□□ -0.69
ATG3-203ENST00000465980 DDX41Q9UJV9 622 aaKnown RBP10.75□□□□□ -0.69
ATG3-203ENST00000465980 STK36Q9NRP7 1315 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 MICAL3Q7RTP6 2002 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 TMEM265A0A087WTH1 108 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 hCG_1642624A0A1W2PR95 340 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 STX6O43752 255 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 DTNBO60941 627 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 PLEKHA8P1O95397 391 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 GGPS1O95749 300 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 CCND2P30279 289 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 GNAQP50148 359 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 GHRHRQ02643 423 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 PGM5Q15124 567 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 PTGISQ16647 500 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 DGKDQ16760 1214 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
ATG3-203ENST00000465980 GDF6Q6KF10 455 aaPredicted RBP10.74□□□□□ -0.69
ATG3-203ENST00000465980 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.74□□□□□ -0.69
ATG3-203ENST00000465980 RPUSD2Q8IZ73 545 aaKnown RBP10.74□□□□□ -0.69
ATG3-203ENST00000465980 CMTR1Q8N1G2 835 aaKnown RBP10.74□□□□□ -0.69
ATG3-203ENST00000465980 KAT2BQ92831 832 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 ALG1Q9BT22 464 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 NKX2-4Q9H2Z4 354 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 ZNF576Q9H609 170 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 ORC3Q9UBD5 711 aaPredicted RBP10.74□□□□□ -0.69
ATG3-203ENST00000465980 ZDHHC9Q9Y397 364 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 SLC4A7Q9Y6M7 1214 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 BDP1A6H8Y1 2624 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 LOXHD1Q8IVV2 1947 aa10.74□□□□□ -0.69
ATG3-203ENST00000465980 UBA1P22314 1058 aaKnown RBP10.73□□□□□ -0.69
ATG3-203ENST00000465980 RABGGTBP53611 331 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 SSRP1Q08945 709 aaKnown RBP10.73□□□□□ -0.69
ATG3-203ENST00000465980 TRAF1Q13077 416 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 PKP1Q13835 747 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 TMTC3Q6ZXV5 915 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 VSIG10LQ86VR7 867 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 PPTC7Q8NI37 304 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 VWCEQ96DN2 955 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 RRP36Q96EU6 259 aaKnown RBP10.73□□□□□ -0.69
ATG3-203ENST00000465980 SPATA33Q96N06 139 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
ATG3-203ENST00000465980 FTOQ9C0B1 505 aaKnown RBP eCLIP10.73□□□□□ -0.69
ATG3-203ENST00000465980 PRDM12Q9H4Q4 367 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 SEC63Q9UGP8 760 aaKnown RBP10.73□□□□□ -0.69
ATG3-203ENST00000465980 MSRAQ9UJ68 235 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 CDV3Q9UKY7 258 aaKnown RBP10.73□□□□□ -0.69
ATG3-203ENST00000465980 MTMR6Q9Y217 621 aa10.73□□□□□ -0.69
ATG3-203ENST00000465980 YBX2Q9Y2T7 364 aaKnown RBP10.73□□□□□ -0.69
ATG3-203ENST00000465980 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 PRPF3O43395 683 aaKnown RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 ZSCAN22P10073 491 aaPredicted RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 MYOGP15173 224 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 SMARCA1P28370 1054 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 SP2Q02086 613 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 PTPN11Q06124 597 aaPredicted RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 BFSP2Q13515 415 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 LAMC2Q13753 1193 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 RAB30Q15771 203 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 KIAA0753Q2KHM9 967 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 HSDL1Q3SXM5 330 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 CELF3Q5SZQ8 465 aaKnown RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 PDXDC2PQ6P474 469 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 USP17L6PQ6QN14 398 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 Q6ZVU0 165 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 SRBD1Q8N5C6 995 aaKnown RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 C7orf31Q8N865 590 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 WASF1Q92558 559 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 PHKBQ93100 1093 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 CTAGE1Q96RT6 745 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 LZTS2Q9BRK4 669 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 SPZ1Q9BXG8 430 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 SLC26A6Q9BXS9 759 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 BCAS3Q9H6U6 928 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 MAP3K20Q9NYL2 800 aaKnown RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
ATG3-203ENST00000465980 TCF20Q9UGU0 1960 aaKnown RBP10.72□□□□□ -0.69
ATG3-203ENST00000465980 VPS37CA5D8V6 355 aaPredicted RBP10.71□□□□□ -0.69
ATG3-203ENST00000465980 TTLL8A6PVC2 850 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 DEXIO95424 95 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 F2P00734 622 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 PFKMP08237 780 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 IQCF3P0C7M6 154 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 ATP2A2P16615 1042 aaKnown RBP10.71□□□□□ -0.69
ATG3-203ENST00000465980 COL4A4P53420 1690 aaPredicted RBP10.71□□□□□ -0.69
ATG3-203ENST00000465980 MRPS9P82933 396 aaKnown RBP10.71□□□□□ -0.69
ATG3-203ENST00000465980 ZNF200P98182 395 aaPredicted RBP10.71□□□□□ -0.69
ATG3-203ENST00000465980 AKAP17AQ02040 695 aaKnown RBP10.71□□□□□ -0.69
ATG3-203ENST00000465980 SP4Q02446 784 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 MYO7AQ13402 2215 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 WDR81Q562E7 1941 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 KCNV1Q6PIU1 500 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 SAMD3Q8N6K7 520 aa10.71□□□□□ -0.69
ATG3-203ENST00000465980 CCDC155Q8N6L0 562 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms