RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 CTDNEP1O95476 244 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 CTSHP09668 335 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 PRPHP41219 470 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 MTERF2Q49AM1 385 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 SH3RF1Q7Z6J0 888 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 ZNF410Q86VK4 478 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 TRIM50Q86XT4 487 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 LRRC27Q9C0I9 530 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 UNC45AQ9H3U1 944 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 SUGCTQ9HAC7 445 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-203ENST00000465756 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 MAFBQ9Y5Q3 323 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-203ENST00000465756 LARGE1O95461 756 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 PHKA2P46019 1235 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 TSHZ1Q6ZSZ6 1077 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 CELF4Q9BZC1 486 aaKnown RBP12.04□□□□□ -0.48
NPHP3-203ENST00000465756 IGSF9BQ9UPX0 1349 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 DENND3A2RUS2 1198 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
NPHP3-203ENST00000465756 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
NPHP3-203ENST00000465756 MTHFD1LQ6UB35 978 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 TPH2Q8IWU9 490 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 ABI1Q8IZP0 508 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 CRYGNQ8WXF5 182 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 AK8Q96MA6 479 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 NR5A1Q13285 461 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
NPHP3-203ENST00000465756 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 TMEM240Q5SV17 173 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 ARL6IP4Q66PJ3 421 aaKnown RBP12.03□□□□□ -0.48
NPHP3-203ENST00000465756 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 UBE2Q2Q8WVN8 375 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 ATP6V0A4Q9HBG4 840 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 KCNMB3Q9NPA1 279 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 CDY2AQ9Y6F7 541 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 IGKV6D-21A0A0A0MT36 114 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 LPXNO60711 386 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 FDPSP14324 419 aaKnown RBP12.03□□□□□ -0.48
NPHP3-203ENST00000465756 UBA7P41226 1012 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 SHHQ15465 462 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 ZNF174Q15697 407 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 NLRP7Q8WX94 980 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 GINS2Q9Y248 185 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 GRIN2DO15399 1336 aa12.03□□□□□ -0.48
NPHP3-203ENST00000465756 MYH7BA7E2Y1 1941 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 TREHO43280 583 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 DGAT1O75907 488 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 CRYBB1P53674 252 aaPredicted RBP12.02□□□□□ -0.48
NPHP3-203ENST00000465756 CSPP1Q1MSJ5 1256 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 CCDC60Q8IWA6 550 aaPredicted RBP12.02□□□□□ -0.48
NPHP3-203ENST00000465756 CNNM3Q8NE01 707 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 DNAJB3Q8WWF6 145 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 TIFAQ96CG3 184 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.02□□□□□ -0.484e-6■□□□□ 9.4
NPHP3-203ENST00000465756 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.48
NPHP3-203ENST00000465756 C2orf40Q9H1Z8 148 aa12.02□□□□□ -0.48
NPHP3-203ENST00000465756 MBLAC1A4D2B0 266 aaPredicted RBP12.02□□□□□ -0.49
NPHP3-203ENST00000465756 SCP2P22307 547 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 PDIA5Q14554 519 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 DNM3Q9UQ16 869 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 LCTP09848 1927 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 TLL1O43897 1013 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 ACRP10323 421 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 RAB27AP51159 221 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.49
NPHP3-203ENST00000465756 CUL4AQ13619 759 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
NPHP3-203ENST00000465756 ZNF618Q5T7W0 954 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 OTOP2Q7RTS6 562 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 SCLYQ96I15 445 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 MTRQ99707 1265 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 LXNQ9BS40 222 aa12.02□□□□□ -0.49
NPHP3-203ENST00000465756 POLR3CQ9BUI4 534 aaPredicted RBP12.02□□□□□ -0.49
NPHP3-203ENST00000465756 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.49
NPHP3-203ENST00000465756 LYPLA2O95372 231 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 KRT18P05783 430 aaKnown RBP12.01□□□□□ -0.49
NPHP3-203ENST00000465756 STK38Q15208 465 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 ETNPPLQ8TBG4 499 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 PGBD4Q96DM1 585 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 YME1L1Q96TA2 773 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 ERLIN2O94905 339 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 CCNE2O96020 404 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 CXCL10P02778 98 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 U2AF2P26368 475 aaKnown RBP eCLIP12.01□□□□□ -0.494e-6■■□□□ 13.2
NPHP3-203ENST00000465756 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
NPHP3-203ENST00000465756 PTPROQ16827 1216 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 SNX29Q8TEQ0 813 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 INSL6Q9Y581 213 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 M0R2N6 131 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 TRMT1LQ7Z2T5 733 aaKnown RBP12.01□□□□□ -0.49
NPHP3-203ENST00000465756 SRGAP1Q7Z6B7 1085 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 MYOCDQ8IZQ8 938 aa12.01□□□□□ -0.49
NPHP3-203ENST00000465756 CCDC47Q96A33 483 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms