RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 RUFY2Q8WXA3 655 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 AZI2Q9H6S1 392 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 KCNH7Q9NS40 1196 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 LRFN2Q9ULH4 789 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 PCDHA6Q9UN73 950 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 PCDHA8Q9Y5H6 950 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 DMXL1Q9Y485 3027 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 hCG_1642624A0A1W2PR95 340 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 FSD2A1L4K1 749 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 PER2O15055 1255 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 PRC1O43663 620 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 ST18O60284 1047 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 PPFIA3O75145 1194 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 FGF18O76093 207 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 GNAQP50148 359 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 ERVFC1P60507 584 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
CNOT4-208ENST00000465721 KCNC3Q14003 757 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 PTPN21Q16825 1174 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 PLPPR4Q7Z2D5 763 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 CYP2W1Q8TAV3 490 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 CDCA3Q99618 268 aaPredicted RBP13.46□□□□□ -0.25
CNOT4-208ENST00000465721 MXRA8Q9BRK3 442 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 MTA3Q9BTC8 594 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
CNOT4-208ENST00000465721 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
CNOT4-208ENST00000465721 TBKBP1A7MCY6 615 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 C9IYK1 514 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 IBSPP21815 317 aaPredicted RBP13.45□□□□□ -0.26
CNOT4-208ENST00000465721 STAT5BP51692 787 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 NFX1Q12986 1120 aaKnown RBP13.45□□□□□ -0.26
CNOT4-208ENST00000465721 FAM102BQ5T8I3 360 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 FAM43BQ6ZT52 329 aaPredicted RBP13.45□□□□□ -0.26
CNOT4-208ENST00000465721 TMTC3Q6ZXV5 915 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 NME8Q8N427 588 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 MAP4K1Q92918 833 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
CNOT4-208ENST00000465721 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 S1PR5Q9H228 398 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 CWH43Q9H720 699 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 PCDHB7Q9Y5E2 793 aa13.45□□□□□ -0.26
CNOT4-208ENST00000465721 RBM8AQ9Y5S9 174 aaKnown RBP13.45□□□□□ -0.26
CNOT4-208ENST00000465721 CNTNAP5Q8WYK1 1306 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 FRYLO94915 3013 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 IGKV6D-21A0A0A0MT36 114 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 ZBTB42B2RXF5 422 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 RPS6KA5O75582 802 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 ATG7O95352 703 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 CCNE2O96020 404 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 ARP10275 920 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 SLC26A2P50443 739 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
CNOT4-208ENST00000465721 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
CNOT4-208ENST00000465721 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 SYCE2Q6PIF2 218 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 TMEM184AQ6ZMB5 413 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 KIAA0319LQ8IZA0 1049 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 RASGRP4Q8TDF6 673 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 ADAM2Q99965 735 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 AGO4Q9HCK5 861 aaKnown RBP13.44□□□□□ -0.26
CNOT4-208ENST00000465721 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 C1orf112Q9NSG2 853 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 COL1A2P08123 1366 aa13.44□□□□□ -0.26
CNOT4-208ENST00000465721 EP300Q09472 2414 aaPredicted RBP13.43□□□□□ -0.26
CNOT4-208ENST00000465721 DENND3A2RUS2 1198 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 CCDC69A6NI79 296 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 GFRA3O60609 400 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 PDGFBP01127 241 aaPredicted RBP13.43□□□□□ -0.26
CNOT4-208ENST00000465721 FGFR1P11362 822 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 KLRC1P26715 233 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 AVPR2P30518 371 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 APOBRQ0VD83 1088 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 PLPP4Q5VZY2 271 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 ANKRD54Q6NXT1 300 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 NFXL1Q6ZNB6 911 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 SLC24A5Q71RS6 500 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 HEATR3Q7Z4Q2 680 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 FAM228AQ86W67 206 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 CCDC60Q8IWA6 550 aaPredicted RBP13.43□□□□□ -0.26
CNOT4-208ENST00000465721 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 TMEM87BQ96K49 555 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 RNF19AQ9NV58 838 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 TYW1Q9NV66 732 aaKnown RBP13.43□□□□□ -0.26
CNOT4-208ENST00000465721 TMEM260Q9NX78 707 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 ST3GAL5Q9UNP4 418 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 GINS2Q9Y248 185 aa13.43□□□□□ -0.26
CNOT4-208ENST00000465721 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms