RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 SH2D3AQ9BRG2 576 aa11.19□□□□□ -0.62
CTNNB1-211ENST00000465552 SEPT9Q9UHD8 586 aaPredicted RBP11.19□□□□□ -0.62
CTNNB1-211ENST00000465552 VAV3Q9UKW4 847 aa11.19□□□□□ -0.62
CTNNB1-211ENST00000465552 CDH23Q9H251 3354 aa11.19□□□□□ -0.62
CTNNB1-211ENST00000465552 PLXNA4Q9HCM2 1894 aa11.19□□□□□ -0.62
CTNNB1-211ENST00000465552 TTC3P53804 2025 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 RSPH10B2B2RC85 870 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 H3BQV1 296 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 ZNF862O60290 1169 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 HBP1O60381 514 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 OATP04181 439 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 RSPH10BP0C881 870 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 SFNP31947 248 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 RFC2P35250 354 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 GPNMBQ14956 572 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 CALCRLQ16602 461 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 TMCO2Q7Z6W1 182 aaPredicted RBP11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 HERVK_113Q902F9 699 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 MAFBQ9Y5Q3 323 aaPredicted RBP11.18□□□□□ -0.62
CTNNB1-211ENST00000465552 TRIP11Q15643 1979 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 COL1A2P08123 1366 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 MBLAC1A4D2B0 266 aaPredicted RBP11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 RRN3P2A6NIE6 340 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 ZBTB42B2RXF5 422 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 BAG4O95429 457 aaKnown RBP11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 PFKMP08237 780 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 GHRP10912 638 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 ACTN1P12814 892 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 KLRC1P26715 233 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 PBX2P40425 430 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 TXKP42681 527 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 SLC26A2P50443 739 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 RABGGTBP53611 331 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 CYP4A11Q02928 519 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 ZNF174Q15697 407 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 MTERF2Q49AM1 385 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 MTHFD1LQ6UB35 978 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 B3GNT9Q6UX72 402 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 NOSTRINQ8IVI9 506 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 BBXQ8WY36 941 aaPredicted RBP11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 MTIF3Q9H2K0 278 aaKnown RBP11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 FOXP1Q9H334 677 aaPredicted RBP11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 GINS2Q9Y248 185 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 SLC4A7Q9Y6M7 1214 aa11.17□□□□□ -0.62
CTNNB1-211ENST00000465552 VPS37CA5D8V6 355 aaPredicted RBP11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 TBX3O15119 743 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 C22orf31O95567 290 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 CHRNA1P02708 482 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 CLCN3P51790 818 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 DEFB103AP81534 67 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 MRPS6P82932 125 aaKnown RBP11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 SPIRE1Q08AE8 756 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 MGAT3Q09327 533 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 PPP2R5CQ13362 524 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 CTTNQ14247 550 aaKnown RBP11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 ZNF484Q5JVG2 852 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 RASIP1Q5U651 963 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 PLA2G4FQ68DD2 849 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 TAF2Q6P1X5 1199 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 CNKSR3Q6P9H4 555 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 SLFN12Q8IYM2 578 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 LRRC71Q8N4P6 559 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 METTL13Q8N6R0 699 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 DBF4BQ8NFT6 615 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 TNPO1Q92973 898 aaKnown RBP11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 DYDC2Q96IM9 177 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 ZNF668Q96K58 619 aaPredicted RBP11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 FAM167AQ96KS9 214 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 FAM20AQ96MK3 541 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 LXNQ9BS40 222 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 PBX4Q9BYU1 374 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 WRAP73Q9P2S5 460 aaPredicted RBP11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 NOL7Q9UMY1 257 aaKnown RBP11.16□□□□□ -0.62
CTNNB1-211ENST00000465552 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 K7ELQ4 463 aaPredicted RBP11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 M0QZ92 97 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 CXCL10P02778 98 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 VTNP04004 478 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 MYOGP15173 224 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 IBSPP21815 317 aaPredicted RBP11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 DNAJB2P25686 324 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 KCNJ6P48051 423 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 WDR5P61964 334 aaKnown RBP11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 ZNF697Q5TEC3 545 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 FAM117BQ6P1L5 589 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 RSPH3Q86UC2 560 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 RDM1Q8NG50 284 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 TTC12Q9H892 705 aaPredicted RBP11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 PCDHB6Q9Y5E3 794 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 PCDHA2Q9Y5H9 948 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 TRPV2Q9Y5S1 764 aa11.15□□□□□ -0.62
CTNNB1-211ENST00000465552 COL4A6Q14031 1691 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms