RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ZDHHC14Q8IZN3 488 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 CASP10Q92851 521 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 NECTIN4Q96NY8 510 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 PPP1R16BQ96T49 567 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 PCYT2Q99447 389 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 CELF4Q9BZC1 486 aaKnown RBP17.26■□□□□ 0.35
HDAC6-214ENST00000465269 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-214ENST00000465269 MAP3K20Q9NYL2 800 aaKnown RBP17.26■□□□□ 0.35
HDAC6-214ENST00000465269 ERAP1Q9NZ08 941 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 NOC2LQ9Y3T9 749 aaKnown RBP17.26■□□□□ 0.35
HDAC6-214ENST00000465269 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
HDAC6-214ENST00000465269 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
HDAC6-214ENST00000465269 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
HDAC6-214ENST00000465269 TMEM40Q8WWA1 233 aa17.25■□□□□ 0.35
HDAC6-214ENST00000465269 AUTS2Q8WXX7 1259 aa17.25■□□□□ 0.35
HDAC6-214ENST00000465269 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
HDAC6-214ENST00000465269 FBXL21Q9UKT6 434 aa17.25■□□□□ 0.35
HDAC6-214ENST00000465269 M0QZ92 97 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 STK25O00506 426 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
HDAC6-214ENST00000465269 KCNA2P16389 499 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 MTHFRP42898 656 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 PLCB3Q01970 1234 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 ITIH3Q06033 890 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 SEPT1Q8WYJ6 367 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 EVI5LQ96CN4 794 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
HDAC6-214ENST00000465269 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
HDAC6-214ENST00000465269 PUF60Q9UHX1 559 aaKnown RBP17.24■□□□□ 0.35
HDAC6-214ENST00000465269 LZTS1Q9Y250 596 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 SQORQ9Y6N5 450 aa17.24■□□□□ 0.35
HDAC6-214ENST00000465269 DENND3A2RUS2 1198 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 C9IYK1 514 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 CYTH3O43739 400 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 EOMESO95936 686 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 EPCAMP16422 314 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 LAG3P18627 525 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 KRT76Q01546 638 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 PLCB4Q15147 1175 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 SPECC1Q5M775 1068 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 TMC5Q6UXY8 1006 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
HDAC6-214ENST00000465269 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 RNF19AQ9NV58 838 aa17.23■□□□□ 0.35
HDAC6-214ENST00000465269 ZNF213O14771 459 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 STAM2O75886 525 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 CFHP08603 1231 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 KIAA1841Q6NSI8 718 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 SAMD3Q8N6K7 520 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 MRPL43Q8N983 215 aaKnown RBP17.22■□□□□ 0.35
HDAC6-214ENST00000465269 RTP3Q9BQQ7 232 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 SMARCAD1Q9H4L7 1026 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 CYP26B1Q9NR63 512 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 RGS18Q9NS28 235 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 ST3GAL5Q9UNP4 418 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 PCDHA2Q9Y5H9 948 aa17.22■□□□□ 0.35
HDAC6-214ENST00000465269 CACNA1IQ9P0X4 2223 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 ANKRD11Q6UB99 2663 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-214ENST00000465269 KRBA1A5PL33 1030 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 PALM3A6NDB9 673 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-214ENST00000465269 NT5C1B-RDH14C9J2C7 533 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 TDGQ13569 410 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 IFIT1BQ5T764 474 aaKnown RBP17.21■□□□□ 0.35
HDAC6-214ENST00000465269 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 RSAD2Q8WXG1 361 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 RUBCNQ92622 972 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 CASD1Q96PB1 797 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
HDAC6-214ENST00000465269 LAMA4Q16363 1823 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 RRN3P2A6NIE6 340 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 DCNP07585 359 aaKnown RBP17.2■□□□□ 0.34
HDAC6-214ENST00000465269 ITGB5P18084 799 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 SMC1AQ14683 1233 aaKnown RBP17.2■□□□□ 0.34
HDAC6-214ENST00000465269 ATAT1Q5SQI0 421 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 PLCD3Q8N3E9 789 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 ZNF558Q96NG5 402 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 UBAC1Q9BSL1 405 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 RIOX1Q9H6W3 641 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 KCNK12Q9HB15 430 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 DUSP12Q9UNI6 340 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 DENND4AQ7Z401 1863 aa17.2■□□□□ 0.34
HDAC6-214ENST00000465269 FRYQ5TBA9 3013 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 SP9P0CG40 484 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 SEC23AQ15436 765 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 ST3GAL2Q16842 350 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 MTHFD1LQ6UB35 978 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 CYB5R4Q7L1T6 521 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 NLRX1Q86UT6 975 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 SEMA4AQ9H3S1 761 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 SPG21Q9NZD8 308 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms