RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-223ENST00000465143 ATP6V0A1Q93050 837 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 SCLYQ96I15 445 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 UIMC1Q96RL1 719 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 SMARCAD1Q9H4L7 1026 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 IL23AQ9NPF7 189 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.63□□□□□ -1.03
ITSN1-223ENST00000465143 ERAP1Q9NZ08 941 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 CEP131Q9UPN4 1083 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 TELO2Q9Y4R8 837 aa8.63□□□□□ -1.03
ITSN1-223ENST00000465143 CEP290O15078 2479 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 GSTTP1A0A1W2PQM5 241 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 GOLGA6L4A6NEF3 574 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 ZBBXA8MT70 800 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 SMAPO00193 183 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 SOX1O00570 391 aaPredicted RBP8.62□□□□□ -1.03
ITSN1-223ENST00000465143 MARCH6O60337 910 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 FGBP02675 491 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 PFKMP08237 780 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 IQCF3P0C7M6 154 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 ACTN1P12814 892 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 SELPP16109 830 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 CIITAP33076 1130 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 MCM7P33993 719 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 RFC2P35250 354 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 THPOP40225 353 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 ME1P48163 572 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 STAT5BP51692 787 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 PPFIA1Q13136 1202 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 PTK7Q13308 1070 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 ITGB3BPQ13352 177 aaPredicted RBP8.62□□□□□ -1.03
ITSN1-223ENST00000465143 TSR1Q2NL82 804 aaKnown RBP8.62□□□□□ -1.03
ITSN1-223ENST00000465143 SKOR2Q2VWA4 1001 aaPredicted RBP8.62□□□□□ -1.03
ITSN1-223ENST00000465143 FAM160B1Q5W0V3 765 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 TRAF7Q6Q0C0 670 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 OTOP2Q7RTS6 562 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 NEK8Q86SG6 692 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 AFAP1L1Q8TED9 768 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.62□□□□□ -1.03
ITSN1-223ENST00000465143 WNT8AQ9H1J5 351 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 TBC1D22BQ9NU19 505 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 SETD4Q9NVD3 440 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 PCDHA7Q9UN72 937 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 SAMM50Q9Y512 469 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 SMCHD1A6NHR9 2005 aa8.62□□□□□ -1.03
ITSN1-223ENST00000465143 NRCAMQ92823 1304 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 GAS7O60861 476 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 PPP6R2O75170 966 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 PARNO95453 639 aaKnown RBP8.61□□□□□ -1.03
ITSN1-223ENST00000465143 BMP15O95972 392 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 MBD3O95983 291 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 IGBP1P78318 339 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 KRT76Q01546 638 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 PTGDRQ13258 359 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 LETM2Q2VYF4 491 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 TJAP1Q5JTD0 557 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 TMEM240Q5SV17 173 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 LRRC8DQ7L1W4 858 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 PLPPR4Q7Z2D5 763 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 CKAP2LQ8IYA6 745 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 KRI1Q8N9T8 703 aaKnown RBP8.61□□□□□ -1.03
ITSN1-223ENST00000465143 CRYGNQ8WXF5 182 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 NAP1L4Q99733 375 aaKnown RBP8.61□□□□□ -1.03
ITSN1-223ENST00000465143 RNPEPQ9H4A4 650 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 ZNF302Q9NR11 478 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 DDX25Q9UHL0 483 aaKnown RBP8.61□□□□□ -1.03
ITSN1-223ENST00000465143 TRIOBPQ9H2D6 2365 aa8.61□□□□□ -1.03
ITSN1-223ENST00000465143 EMSYQ7Z589 1322 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 PLXNA1Q9UIW2 1896 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 IGLV3-22A0A075B6J6 115 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.6□□□□□ -1.03
ITSN1-223ENST00000465143 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.6□□□□□ -1.03
ITSN1-223ENST00000465143 RRN3P2A6NIE6 340 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 RSPH10B2B2RC85 870 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 MSH4O15457 936 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 TREHO43280 583 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 CHMP2AO43633 222 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 EDIL3O43854 480 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 CCNT1O60563 726 aaKnown RBP8.6□□□□□ -1.03
ITSN1-223ENST00000465143 CUTAO60888 179 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 LGR5O75473 907 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 TDP2O95551 362 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 CCNE2O96020 404 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 PSAPP07602 524 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 CTSHP09668 335 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 RSPH10BP0C881 870 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 CKBP12277 381 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 SLC26A2P50443 739 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 SMAD3P84022 425 aaKnown RBP8.6□□□□□ -1.03
ITSN1-223ENST00000465143 ATP2C1P98194 919 aaPredicted RBP8.6□□□□□ -1.03
ITSN1-223ENST00000465143 GRIK4Q16099 956 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 KLHL40Q2TBA0 621 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 Q4G0T1 1027 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 AXDND1Q5T1B0 1012 aaPredicted RBP8.6□□□□□ -1.03
ITSN1-223ENST00000465143 LRCH2Q5VUJ6 765 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 ADALQ6DHV7 355 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 ZNF746Q6NUN9 644 aaPredicted RBP8.6□□□□□ -1.03
ITSN1-223ENST00000465143 SWSAP1Q6NVH7 229 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 TAF2Q6P1X5 1199 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
ITSN1-223ENST00000465143 C16orf59Q7L2K0 433 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms