RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 FOXP1Q9H334 677 aaPredicted RBP18.32■□□□□ 0.52
SSNA1-204ENST00000464553 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
SSNA1-204ENST00000464553 PPME1Q9Y570 386 aa18.32■□□□□ 0.52
SSNA1-204ENST00000464553 TET1Q8NFU7 2136 aa18.32■□□□□ 0.52
SSNA1-204ENST00000464553 ZNF862O60290 1169 aa18.31■□□□□ 0.52
SSNA1-204ENST00000464553 PSMC5P62195 406 aa18.31■□□□□ 0.52
SSNA1-204ENST00000464553 DEFB103AP81534 67 aa18.31■□□□□ 0.52
SSNA1-204ENST00000464553 HTRA4P83105 476 aaPredicted RBP18.31■□□□□ 0.52
SSNA1-204ENST00000464553 ORC2Q13416 577 aaPredicted RBP18.31■□□□□ 0.52
SSNA1-204ENST00000464553 FAM184AQ8NB25 1140 aa18.31■□□□□ 0.52
SSNA1-204ENST00000464553 MYLIPQ8WY64 445 aa18.31■□□□□ 0.52
SSNA1-204ENST00000464553 HAS1Q92839 578 aa18.31■□□□□ 0.52
SSNA1-204ENST00000464553 TBC1D32Q96NH3 1257 aa18.31■□□□□ 0.52
SSNA1-204ENST00000464553 CHMP2AO43633 222 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 P4HBP07237 508 aaKnown RBP18.3■□□□□ 0.52
SSNA1-204ENST00000464553 CA3P07451 260 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 GHRP10912 638 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 MYOGP15173 224 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 FOSL2P15408 326 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 POU3F3P20264 500 aaPredicted RBP18.3■□□□□ 0.52
SSNA1-204ENST00000464553 PRKCEQ02156 737 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 TAP1Q03518 808 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 EPHA7Q15375 998 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
SSNA1-204ENST00000464553 EARS2Q5JPH6 523 aaKnown RBP18.3■□□□□ 0.52
SSNA1-204ENST00000464553 JPH2Q9BR39 696 aaPredicted RBP18.3■□□□□ 0.52
SSNA1-204ENST00000464553 VAV3Q9UKW4 847 aa18.3■□□□□ 0.52
SSNA1-204ENST00000464553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.29■□□□□ 0.52
SSNA1-204ENST00000464553 ENPP3O14638 875 aa18.29■□□□□ 0.52
SSNA1-204ENST00000464553 QARSP47897 775 aaKnown RBP18.29■□□□□ 0.52
SSNA1-204ENST00000464553 CRYBB1P53674 252 aaPredicted RBP18.29■□□□□ 0.52
SSNA1-204ENST00000464553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.29■□□□□ 0.52
SSNA1-204ENST00000464553 MAP7D2Q96T17 732 aa18.29■□□□□ 0.52
SSNA1-204ENST00000464553 PCDHA12Q9UN75 941 aa18.29■□□□□ 0.52
SSNA1-204ENST00000464553 GPR182O15218 404 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 TRAPPC10P48553 1259 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 TBC1D8BQ0IIM8 1120 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 EFCAB12Q6NXP0 572 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 C4orf19Q8IY42 314 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 MYOCDQ8IZQ8 938 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 METTL13Q8N6R0 699 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 LINC01465Q8N7H1 131 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 MAFAQ8NHW3 353 aaPredicted RBP18.28■□□□□ 0.52
SSNA1-204ENST00000464553 SP7Q8TDD2 431 aaPredicted RBP18.28■□□□□ 0.52
SSNA1-204ENST00000464553 GJA10Q969M2 543 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 SAMD11Q96NU1 681 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 OSBPL7Q9BZF2 842 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 PRDM12Q9H4Q4 367 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 PADI3Q9ULW8 664 aa18.28■□□□□ 0.52
SSNA1-204ENST00000464553 IGKV6-21A0A0C4DH24 114 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 DTNBO60941 627 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 STBD1O95210 358 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 DNM2P50570 870 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 ERVK-21P61565 698 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 PAK2Q13177 524 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 CALCRLQ16602 461 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 OTUD6AQ7L8S5 288 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 ZBTB10Q96DT7 871 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 TGS1Q96RS0 853 aaKnown RBP18.27■□□□□ 0.52
SSNA1-204ENST00000464553 AGO3Q9H9G7 860 aaKnown RBP18.27■□□□□ 0.52
SSNA1-204ENST00000464553 LMCD1Q9NZU5 365 aa18.27■□□□□ 0.52
SSNA1-204ENST00000464553 DDX11L8A8MPP1 907 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 EML1O00423 815 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 NEMFO60524 1076 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 GPR32O75388 356 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 U2AF2P26368 475 aaKnown RBP eCLIP18.26■□□□□ 0.51
SSNA1-204ENST00000464553 CD52P31358 61 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 SPIRE1Q08AE8 756 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 UGCGQ16739 394 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 NEK9Q8TD19 979 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 MTMR9Q96QG7 549 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 TSPYL2Q9H2G4 693 aaPredicted RBP18.26■□□□□ 0.51
SSNA1-204ENST00000464553 ZSWIM4Q9H7M6 989 aa18.26■□□□□ 0.51
SSNA1-204ENST00000464553 FAM205CA6NFA0 338 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 MAFO75444 373 aaPredicted RBP18.25■□□□□ 0.51
SSNA1-204ENST00000464553 RPS6KA5O75582 802 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 LYPLA2O95372 231 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 STAG3L1P0CL83 205 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
SSNA1-204ENST00000464553 TMEM62Q0P6H9 643 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 TRMT1LQ7Z2T5 733 aaKnown RBP18.25■□□□□ 0.51
SSNA1-204ENST00000464553 NOSTRINQ8IVI9 506 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 CEP89Q96ST8 783 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 YME1L1Q96TA2 773 aa18.25■□□□□ 0.51
SSNA1-204ENST00000464553 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
SSNA1-204ENST00000464553 LAMA2P24043 3122 aaKnown RBP18.25■□□□□ 0.51
SSNA1-204ENST00000464553 MYH9P35579 1960 aaKnown RBP18.24■□□□□ 0.51
SSNA1-204ENST00000464553 LINC01553A4QN01 128 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
SSNA1-204ENST00000464553 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
SSNA1-204ENST00000464553 GNL2Q13823 731 aaKnown RBP18.24■□□□□ 0.51
SSNA1-204ENST00000464553 ANO5Q75V66 913 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 RTN4RL1Q86UN2 441 aaPredicted RBP18.24■□□□□ 0.51
SSNA1-204ENST00000464553 CRIPAKQ8N1N5 446 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 BANK1Q8NDB2 785 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 HSD17B14Q9BPX1 270 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 BACH2Q9BYV9 841 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms