RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 UBXN2BQ14CS0 331 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 AASDHQ4L235 1098 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-211ENST00000463372 FAM102BQ5T8I3 360 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 KCNT2Q6UVM3 1135 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 DNAJB3Q8WWF6 145 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 ADAM33Q9BZ11 813 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 GPCPD1Q9NPB8 672 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 COL20A1Q9P218 1284 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 PADI3Q9ULW8 664 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 SQORQ9Y6N5 450 aa15.63■□□□□ 0.09
C9orf3-211ENST00000463372 FRMPD2Q68DX3 1309 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-211ENST00000463372 CYSRT1A8MQ03 144 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 KCNK5O95279 499 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 CXCL14O95715 111 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 CHGBP05060 677 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 UBA1P22314 1058 aaKnown RBP15.62■□□□□ 0.09
C9orf3-211ENST00000463372 PDE4AP27815 886 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 MRPS6P82932 125 aaKnown RBP15.62■□□□□ 0.09
C9orf3-211ENST00000463372 IER5Q5VY09 327 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 ZSCAN25Q6NSZ9 544 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 TBC1D5Q92609 795 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 STAMQ92783 540 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 ZNF558Q96NG5 402 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 STRBPQ96SI9 672 aaKnown RBP15.62■□□□□ 0.09
C9orf3-211ENST00000463372 SLC2A4RGQ9NR83 387 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 SPG21Q9NZD8 308 aa15.62■□□□□ 0.09
C9orf3-211ENST00000463372 M0QZ92 97 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 TM4SF5O14894 197 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 SLC3A2P08195 630 aaKnown RBP15.61■□□□□ 0.09
C9orf3-211ENST00000463372 TGFB3P10600 412 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 NRLP54845 237 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 SP2Q02086 613 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 FOXC1Q12948 553 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 MCF2L2Q86YR7 1114 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 ERC1Q8IUD2 1116 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 LURAP1LQ8IV03 231 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 FEZF2Q8TBJ5 459 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 MAP4K1Q92918 833 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 TMEM121BQ9BXQ6 578 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-211ENST00000463372 OSBPL6Q9BZF3 934 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 SDK1Q7Z5N4 2213 aa15.61■□□□□ 0.09
C9orf3-211ENST00000463372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-211ENST00000463372 FAM170BA6NMN3 283 aa15.6■□□□□ 0.09
C9orf3-211ENST00000463372 N4BP1O75113 896 aaKnown RBP15.6■□□□□ 0.09
C9orf3-211ENST00000463372 RPLP2P05387 115 aaKnown RBP15.6■□□□□ 0.09
C9orf3-211ENST00000463372 MYCLP12524 364 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-211ENST00000463372 PXMP2Q9NR77 195 aa15.6■□□□□ 0.09
C9orf3-211ENST00000463372 EPS15L1Q9UBC2 864 aa15.6■□□□□ 0.09
C9orf3-211ENST00000463372 TUBE1Q9UJT0 475 aa15.6■□□□□ 0.09
C9orf3-211ENST00000463372 TSPY2A6NKD2 308 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 APPP05067 770 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 NCLP19338 710 aaKnown RBP15.59■□□□□ 0.09
C9orf3-211ENST00000463372 PBX3P40426 434 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 SNW1Q13573 536 aaKnown RBP15.59■□□□□ 0.09
C9orf3-211ENST00000463372 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
C9orf3-211ENST00000463372 PSAPL1Q6NUJ1 521 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 C15orf39Q6ZRI6 1047 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-211ENST00000463372 PPFIBP1Q86W92 1011 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 TRIM50Q86XT4 487 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 SLC22A17Q8WUG5 538 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 ARHGAP45Q92619 1136 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 IL1RAPL2Q9NP60 686 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 PRMT8Q9NR22 394 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-211ENST00000463372 LAMA4Q16363 1823 aa15.59■□□□□ 0.09
C9orf3-211ENST00000463372 MYO18BQ8IUG5 2567 aa15.58■□□□□ 0.09
C9orf3-211ENST00000463372 DENND3A2RUS2 1198 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 NMT2O60551 498 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 HSPD1P10809 573 aaKnown RBP15.58■□□□□ 0.08
C9orf3-211ENST00000463372 SPINK2P20155 84 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 GIT2Q14161 759 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 ZBTB41Q5SVQ8 909 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 C12orf50Q8NA57 414 aaPredicted RBP15.58■□□□□ 0.08
C9orf3-211ENST00000463372 GATA6Q92908 595 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 TMX1Q9H3N1 280 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 ATP6V0A4Q9HBG4 840 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 IL17RBQ9NRM6 502 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 RXFP3Q9NSD7 469 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 C1orf112Q9NSG2 853 aa15.58■□□□□ 0.08
C9orf3-211ENST00000463372 MTF2Q9Y483 593 aaPredicted RBP15.58■□□□□ 0.08
C9orf3-211ENST00000463372 NCAM2O15394 837 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 FGFR1P11362 822 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 PRKCQQ04759 706 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 NFX1Q12986 1120 aaKnown RBP15.57■□□□□ 0.08
C9orf3-211ENST00000463372 PPFIA1Q13136 1202 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 SIM2Q14190 667 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-211ENST00000463372 PPP2R5DQ14738 602 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 SLC24A5Q71RS6 500 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 PDZD3Q86UT5 571 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 BBXQ8WY36 941 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-211ENST00000463372 KLHL5Q96PQ7 755 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 DDX23Q9BUQ8 820 aaKnown RBP15.57■□□□□ 0.08
C9orf3-211ENST00000463372 LSM14BQ9BX40 385 aaKnown RBP15.57■□□□□ 0.08
C9orf3-211ENST00000463372 FAM49AQ9H0Q0 323 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-211ENST00000463372 BOLA2Q9H3K6 86 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 TRPV2Q9Y5S1 764 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 ABCB11O95342 1321 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 IGSF9BQ9UPX0 1349 aa15.57■□□□□ 0.08
C9orf3-211ENST00000463372 SPAG17Q6Q759 2223 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms