RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 GPRC5BQ9NZH0 403 aa3.92□□□□□ -1.78
NDUFA4-202ENST00000463308 ESYT3A0FGR9 886 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 PRODHO43272 600 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 FGFR1P11362 822 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 MSX2P35548 267 aaPredicted RBP3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 RRADP55042 308 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 FOXL1Q12952 345 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 FAM47CQ5HY64 1035 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 PHF19Q5T6S3 580 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 NSMFQ6X4W1 530 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 RTKN2Q8IZC4 609 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 CLEC4DQ8WXI8 215 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 ZNF428Q96B54 188 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 TRIM55Q9BYV6 548 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 NELFAQ9H3P2 528 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 RBPJLQ9UBG7 517 aa3.91□□□□□ -1.78
NDUFA4-202ENST00000463308 A0A1W2PQU0 124 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 PRAMEF25A6NGN4 478 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 ARHGAP6O43182 974 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 ZNF888P0CJ79 500 aaPredicted RBP3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 COL6A2P12110 1019 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 TCF3P15923 654 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 EPHA5P54756 1037 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 MAP3K12Q12852 859 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 PAK1Q13153 545 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 CRHR2Q13324 411 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 RNF151Q2KHN1 245 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 BTBD8Q5XKL5 378 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 STYK1Q6J9G0 422 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 ZNF662Q6ZS27 426 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 HDGFL2Q7Z4V5 671 aaPredicted RBP3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 ADGRE4PQ86SQ3 457 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 SGMS1Q86VZ5 419 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 ST13P5Q8NFI4 369 aaPredicted RBP3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 SCARB1Q8WTV0 552 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 HAS1Q92839 578 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 CDC6Q99741 560 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 CATSPERZQ9NTU4 200 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 PLA2G3Q9NZ20 509 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 WASF3Q9UPY6 502 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 ATP23Q9Y6H3 246 aa3.9□□□□□ -1.79
NDUFA4-202ENST00000463308 DLX3O60479 287 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 PABPC1P11940 636 aaKnown RBP3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 PTGS1P23219 599 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 DBPQ10586 325 aaPredicted RBP3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 TOP3AQ13472 1001 aaPredicted RBP3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 CRY1Q16526 586 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 DDR2Q16832 855 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 FIGNQ5HY92 759 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 MRM1Q6IN84 353 aaKnown RBP3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 DENND5AQ6IQ26 1287 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 MAMDC2Q7Z304 686 aaPredicted RBP3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 RD3Q7Z3Z2 195 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 PROSER1Q86XN7 944 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 SMG7Q92540 1137 aaKnown RBP3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 NRDE2Q9H7Z3 1164 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 ZNF408Q9H9D4 720 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 INCENPQ9NQS7 918 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 FAM184BQ9ULE4 1060 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 PTPN22Q9Y2R2 807 aa3.89□□□□□ -1.79
NDUFA4-202ENST00000463308 NKRFO15226 690 aaKnown RBP eCLIP3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 LTFP02788 710 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 PTPN1P18031 435 aaKnown RBP3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 KCNQ1P51787 676 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 GPR19Q15760 415 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 USP30Q70CQ3 517 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 MRGPREQ86SM8 312 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 RBM12BQ8IXT5 1001 aaKnown RBP3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 CALML6Q8TD86 181 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 WASF1Q92558 559 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 FBXW5Q969U6 566 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 OR10A2Q9H208 303 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 IPPKQ9H8X2 491 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 SLC39A2Q9NP94 309 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 ST7Q9NRC1 585 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 PPARGC1AQ9UBK2 798 aaKnown RBP3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 SRPK3Q9UPE1 567 aa3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 CCDC9Q9Y3X0 531 aaKnown RBP3.88□□□□□ -1.79
NDUFA4-202ENST00000463308 CAPN14A8MX76 684 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 MSCO60682 206 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 PPFIA4O75335 1185 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 CAPNS1P04632 268 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 FGRP09769 529 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 GRIA2P42262 883 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 SESN2P58004 480 aaPredicted RBP3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 HERVK_113P62684 666 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 SLC25A3Q00325 362 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 NFYCQ13952 458 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 RRP1BQ14684 758 aaKnown RBP3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 PCOLCEQ15113 449 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 ARHGAP36Q6ZRI8 547 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 MCF2L2Q86YR7 1114 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 ANKRD35Q8N283 1001 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 D2HGDHQ8N465 521 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 NELL1Q92832 810 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 LPPQ93052 612 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 ZNF669Q96BR6 464 aaPredicted RBP3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 CD244Q9BZW8 370 aa3.87□□□□□ -1.79
NDUFA4-202ENST00000463308 ZDHHC5Q9C0B5 715 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms