RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PARP2Q9UGN5 583 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 GGA1Q9UJY5 639 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NAGPAQ9UK23 515 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 AMFRQ9UKV5 643 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 PCDHA12Q9UN75 941 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NOVA2Q9UNW9 492 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 DNM3Q9UQ16 869 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TRAF3IP3Q9Y228 551 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 PCDHA2Q9Y5H9 948 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NFS1Q9Y697 457 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NCANO14594 1321 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 MYO3BQ8WXR4 1341 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ZNF335Q9H4Z2 1342 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 C10orf71Q711Q0 1435 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ABCA3Q99758 1704 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 CACNA1SQ13698 1873 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 LAMB2P55268 1798 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MAST2Q6P0Q8 1798 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 GAKO14976 1311 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 UBE4BO95155 1302 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SPATA31A5Q5VU36 1347 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SPATA31A7Q8IWB4 1347 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CYP3A7-CYP3A51PA0A087WV96 503 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 IGKV6D-41A0A0C4DH26 115 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 GTPBP10A4D1E9 387 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 POTEFA5A3E0 1075 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MPHOSPH10O00566 681 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DDX3XO00571 662 aaKnown RBP eCLIP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 PDXKO00764 312 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 TBX3O15119 743 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 GNPATO15228 680 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 EIF3DO15371 548 aaKnown RBP eCLIP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DAPK3O43293 454 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 PPFIA2O75334 1257 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RPS6KA4O75676 772 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RASSF9O75901 435 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DNAJC8O75937 253 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 FAM13AO94988 1023 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 GCNT3O95395 438 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 FOSP01100 380 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 FGGP02679 453 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 NR3C1P04150 777 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 GSTA1P08263 222 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MMEP08473 750 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 NUDT17P0C025 328 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 POTEIP0CG38 1075 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 IL1R1P14778 569 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 AKR1B1P15121 316 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SLC9A1P19634 815 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DRD4P21917 467 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RFX1P22670 979 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CYP3A7P24462 503 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 PON1P27169 355 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 ECHS1P30084 290 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SLC8A1P32418 973 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 STAT3P40763 770 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SEC24CP53992 1094 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SLC12A3P55017 1021 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 EIF6P56537 245 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 GSCP56915 257 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 JAM2P57087 298 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RHBDL3P58872 404 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 PTENP60484 403 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MAGOHP61326 146 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MYL7Q01449 175 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 ADCY2Q08462 1091 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 PICALMQ13492 652 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 PRPF4BQ13523 1007 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 BYSLQ13895 437 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DHX34Q14147 1143 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 ITIH4Q14624 930 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 EPHA7Q15375 998 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 GRIK5Q16478 980 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 ECM1Q16610 540 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 BMT2Q1RMZ1 405 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 NBPF9Q3BBW0 867 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 PREPLQ4J6C6 727 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 LACTB2Q53H82 288 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MFSD14BQ5SR56 506 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CYB5D1Q6P9G0 228 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 POTEGQ6S5H5 508 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 POTEEQ6S8J3 1075 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 C6orf89Q6UWU4 347 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 IRF2BP2Q7Z5L9 587 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SLFN11Q7Z7L1 901 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 NT5DC3Q86UY8 548 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 TXNRD3Q86VQ6 643 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SFR1Q86XK3 245 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RHOT2Q8IXI1 618 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 FAM186BQ8IYM0 893 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 METTL13Q8N6R0 699 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 UBL4BQ8N7F7 174 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 ANKS4BQ8N8V4 417 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CNBD1Q8NA66 436 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC197Q8NCU1 140 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 OR2W6PQ8NHA6 318 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MAGEC3Q8TD91 643 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DCAF4Q8WV16 495 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SEC14L1Q92503 715 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms