RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-222ENST00000462212 RABGGTBP53611 331 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 DEFB103AP81534 67 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 GUCY1B3Q02153 619 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 LPIN1Q14693 890 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 TARBP2Q15633 366 aaKnown RBP9.4□□□□□ -0.9
ITSN1-222ENST00000462212 FBXO47Q5MNV8 452 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 IER5Q5VY09 327 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 SLFN12Q8IYM2 578 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 KIAA0319LQ8IZA0 1049 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 FAM161BQ96MY7 647 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 MTMR9Q96QG7 549 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 CEP89Q96ST8 783 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 CDX2Q99626 313 aaPredicted RBP9.4□□□□□ -0.9
ITSN1-222ENST00000462212 NIFKQ9BYG3 293 aaKnown RBP9.4□□□□□ -0.9
ITSN1-222ENST00000462212 IFIH1Q9BYX4 1025 aaKnown RBP9.4□□□□□ -0.9
ITSN1-222ENST00000462212 FAM49AQ9H0Q0 323 aaPredicted RBP9.4□□□□□ -0.9
ITSN1-222ENST00000462212 ZNF576Q9H609 170 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 STXBP5LQ9Y2K9 1186 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 TRPV2Q9Y5S1 764 aa9.4□□□□□ -0.9
ITSN1-222ENST00000462212 CHD9Q3L8U1 2897 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 LOXHD1Q8IVV2 1947 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 MAGEB2O15479 319 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 GJB5O95377 273 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 GHRP10912 638 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 MYOGP15173 224 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 U2AF2P26368 475 aaKnown RBP eCLIP9.39□□□□□ -0.91
ITSN1-222ENST00000462212 PSMC5P62195 406 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 ORC2Q13416 577 aaPredicted RBP9.39□□□□□ -0.91
ITSN1-222ENST00000462212 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 XKR3Q5GH77 459 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
ITSN1-222ENST00000462212 TSHZ1Q6ZSZ6 1077 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 FAM43BQ6ZT52 329 aaPredicted RBP9.39□□□□□ -0.91
ITSN1-222ENST00000462212 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 USP38Q8NB14 1042 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 CELF4Q9BZC1 486 aaKnown RBP9.39□□□□□ -0.91
ITSN1-222ENST00000462212 NKX2-4Q9H2Z4 354 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 AGO3Q9H9G7 860 aaKnown RBP9.39□□□□□ -0.91
ITSN1-222ENST00000462212 NRBP2Q9NSY0 501 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 TTC3P53804 2025 aa9.39□□□□□ -0.91
ITSN1-222ENST00000462212 IGKV6-21A0A0C4DH24 114 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.38□□□□□ -0.91
ITSN1-222ENST00000462212 KIF28PB7ZC32 967 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 M0QZ92 97 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 NEMFO60524 1076 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
ITSN1-222ENST00000462212 P4HBP07237 508 aaKnown RBP9.38□□□□□ -0.91
ITSN1-222ENST00000462212 CA3P07451 260 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 QARSP47897 775 aaKnown RBP9.38□□□□□ -0.91
ITSN1-222ENST00000462212 TRAPPC10P48553 1259 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 TMEM62Q0P6H9 643 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 EPHA7Q15375 998 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 CALCRLQ16602 461 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 ANO5Q75V66 913 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 TMCO2Q7Z6W1 182 aaPredicted RBP9.38□□□□□ -0.91
ITSN1-222ENST00000462212 C4orf19Q8IY42 314 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 TOP1MTQ969P6 601 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 SLC28A3Q9HAS3 691 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 WRAP73Q9P2S5 460 aaPredicted RBP9.38□□□□□ -0.91
ITSN1-222ENST00000462212 KIF3AQ9Y496 699 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 COL4A6Q14031 1691 aa9.38□□□□□ -0.91
ITSN1-222ENST00000462212 CHD7Q9P2D1 2997 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 TLL1O43897 1013 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 DKC1O60832 514 aaKnown RBP eCLIP9.37□□□□□ -0.91
ITSN1-222ENST00000462212 GPR32O75388 356 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 ARHGEF15O94989 841 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 AMHP03971 560 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 GJB2P29033 226 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 CD52P31358 61 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 CLCN3P51790 818 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 HTRA4P83105 476 aaPredicted RBP9.37□□□□□ -0.91
ITSN1-222ENST00000462212 TAP1Q03518 808 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 CUL4AQ13619 759 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 EFCAB12Q6NXP0 572 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 TRMT1LQ7Z2T5 733 aaKnown RBP9.37□□□□□ -0.91
ITSN1-222ENST00000462212 METTL13Q8N6R0 699 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 TMEM40Q8WWA1 233 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 MYLIPQ8WY64 445 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 RAD9AQ99638 391 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 HSD17B14Q9BPX1 270 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 LXNQ9BS40 222 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 FTHL17Q9BXU8 183 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 TMEM60Q9H2L4 133 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 TTC12Q9H892 705 aaPredicted RBP9.37□□□□□ -0.91
ITSN1-222ENST00000462212 CDHR5Q9HBB8 845 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
ITSN1-222ENST00000462212 PADI3Q9ULW8 664 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 PCDHA12Q9UN75 941 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 PPME1Q9Y570 386 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 COL6A3P12111 3177 aa9.37□□□□□ -0.91
ITSN1-222ENST00000462212 LCHNA4D1U4 455 aa9.36□□□□□ -0.91
ITSN1-222ENST00000462212 TMEM150BA6NC51 233 aa9.36□□□□□ -0.91
ITSN1-222ENST00000462212 ENPP3O14638 875 aa9.36□□□□□ -0.91
ITSN1-222ENST00000462212 MARCH6O60337 910 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms