RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.234e-8■□□□□ 10.9
ERGIC3-211ENST00000461043 CTTNQ14247 550 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 PTPAQ15257 358 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 TMEM266Q2M3C6 531 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 DTHD1Q6ZMT9 781 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 KIAA0319LQ8IZA0 1049 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 RETREG2Q8NC44 543 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 FTOQ9C0B1 505 aaKnown RBP eCLIP13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 UBE2OQ9C0C9 1292 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 TUFT1Q9NNX1 390 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 CDH23Q9H251 3354 aa13.59□□□□□ -0.23
ERGIC3-211ENST00000461043 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 RSPH10B2B2RC85 870 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 ZBTB39O15060 712 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 MAGEB2O15479 319 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 NBNO60934 754 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 BRD1O95696 1058 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 F13A1P00488 732 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 CHRNA1P02708 482 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 RSPH10BP0C881 870 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 YWHABP31946 246 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 DDIT3P35638 169 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 PLA2G4FQ68DD2 849 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 DNAJB3Q8WWF6 145 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 USP28Q96RU2 1077 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 MMTAG2Q9BU76 263 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 LRWD1Q9UFC0 647 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 ZDHHC9Q9Y397 364 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 PPME1Q9Y570 386 aa13.58□□□□□ -0.24
ERGIC3-211ENST00000461043 PP2D1A8MPX8 630 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 MAFO75444 373 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 PFKMP08237 780 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 MUTP22033 750 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 NASPP49321 788 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 NPEPPSP55786 919 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 MKRN4PQ13434 485 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 ECM1Q16610 540 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 MTERF2Q49AM1 385 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 C9orf50Q5SZB4 431 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 RASIP1Q5U651 963 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 TRMT1LQ7Z2T5 733 aaKnown RBP13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 RSPH3Q86UC2 560 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 TPH2Q8IWU9 490 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 TDHQ8IZJ6 230 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 NME8Q8N427 588 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.241e-5■□□□□ 8.6
ERGIC3-211ENST00000461043 SH2D3AQ9BRG2 576 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 OSBPL7Q9BZF2 842 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 FAM49AQ9H0Q0 323 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 CYP26B1Q9NR63 512 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 ANKEF1Q9NU02 776 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 CHD7Q9P2D1 2997 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 KAT6AQ92794 2004 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 KDM3AQ9Y4C1 1321 aa13.57□□□□□ -0.24
ERGIC3-211ENST00000461043 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 SIP14410 1827 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 VWA3AA6NCI4 1184 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 CTSHP09668 335 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 ACRP10323 421 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 MRPS6P82932 125 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 TBC1D8BQ0IIM8 1120 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 SHHQ15465 462 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 TCTN1Q2MV58 587 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 AK8Q96MA6 479 aa13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 DHX33Q9H6R0 707 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
ERGIC3-211ENST00000461043 MYH15Q9Y2K3 1946 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 RBAK-RBAKDNI3L0D1 243 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 RFC5P40937 340 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 RARRES1P49788 294 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 CLCN3P51790 818 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 GRIN1Q05586 938 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 DRP2Q13474 957 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 SLC39A14Q15043 492 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 PLEKHG4Q58EX7 1191 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 HYIQ5T013 277 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 IER5Q5VY09 327 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 EFCAB12Q6NXP0 572 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 LRRC71Q8N4P6 559 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 SNX29Q8TEQ0 813 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 HERVK_113Q902F9 699 aa13.55□□□□□ -0.24
ERGIC3-211ENST00000461043 CEP170P1Q96L14 293 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms