RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 NPEPPSP55786 919 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 ITGA7Q13683 1181 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 DHX8Q14562 1220 aaKnown RBP11.35□□□□□ -0.59
UPF2-204ENST00000460569 GRIK4Q16099 956 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 KCTD17Q8N5Z5 321 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 IQUBQ8NA54 791 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 RAD54LQ92698 747 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 CEP170P1Q96L14 293 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 PYM1Q9BRP8 204 aaKnown RBP11.35□□□□□ -0.59
UPF2-204ENST00000460569 BHMT2Q9H2M3 363 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 CYP26B1Q9NR63 512 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 ANKEF1Q9NU02 776 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 LMBRD1Q9NUN5 540 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 BLOC1S4Q9NUP1 217 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
UPF2-204ENST00000460569 COL1A2P08123 1366 aa11.35□□□□□ -0.59
UPF2-204ENST00000460569 C17orf102A2RUQ5 167 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 CCDC85CA6NKD9 419 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 USO1O60763 962 aaKnown RBP11.34□□□□□ -0.59
UPF2-204ENST00000460569 PLA2G4BP0C869 781 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 LIG1P18858 919 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 SOX10P56693 466 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 FAM160A1Q05DH4 1040 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 MCM6Q14566 821 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 E2F4Q16254 413 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 NAALADL2Q58DX5 795 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 ZNF484Q5JVG2 852 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 NFRKBQ6P4R8 1299 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 CEP57L1Q8IYX8 460 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 LRRC15Q8TF66 581 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 LARP4BQ92615 738 aaKnown RBP11.34□□□□□ -0.59
UPF2-204ENST00000460569 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
UPF2-204ENST00000460569 NIFKQ9BYG3 293 aaKnown RBP11.34□□□□□ -0.59
UPF2-204ENST00000460569 C11orf49Q9H6J7 331 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
UPF2-204ENST00000460569 SETD4Q9NVD3 440 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 EVPLQ92817 2033 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 MYH11P35749 1972 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 GRIN2DO15399 1336 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 NRCAMQ92823 1304 aa11.34□□□□□ -0.59
UPF2-204ENST00000460569 RRN3P2A6NIE6 340 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 ZBTB42B2RXF5 422 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 ARVCFO00192 962 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
UPF2-204ENST00000460569 GNAT1P11488 350 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 COL6A1P12109 1028 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 XRCC6P12956 609 aaKnown RBP eCLIP11.33□□□□□ -0.63e-6■□□□□ 11
UPF2-204ENST00000460569 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
UPF2-204ENST00000460569 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
UPF2-204ENST00000460569 TBC1D8BQ0IIM8 1120 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 TARBP2Q15633 366 aaKnown RBP11.33□□□□□ -0.6
UPF2-204ENST00000460569 NECAB2Q7Z6G3 386 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 GPBP1Q86WP2 473 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 FMR1NBQ8N0W7 255 aaPredicted RBP11.33□□□□□ -0.6
UPF2-204ENST00000460569 CUEDC2Q9H467 287 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 USP25Q9UHP3 1055 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 TUBE1Q9UJT0 475 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 PPME1Q9Y570 386 aa11.33□□□□□ -0.6
UPF2-204ENST00000460569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
UPF2-204ENST00000460569 KINO60870 393 aaKnown RBP11.32□□□□□ -0.6
UPF2-204ENST00000460569 NR1I2O75469 434 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 ZNF202O95125 648 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 C22orf31O95567 290 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 HOXC8P31273 242 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 RFC5P40937 340 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
UPF2-204ENST00000460569 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
UPF2-204ENST00000460569 SNW1Q13573 536 aaKnown RBP11.32□□□□□ -0.6
UPF2-204ENST00000460569 HIC1Q14526 733 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 EMC2Q15006 297 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 LONRF3Q496Y0 759 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
UPF2-204ENST00000460569 PADI6Q6TGC4 694 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 KRBA2Q6ZNG9 492 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 SV2BQ7L1I2 683 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 SESTD1Q86VW0 696 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 SYT2Q8N9I0 419 aaPredicted RBP11.32□□□□□ -0.6
UPF2-204ENST00000460569 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 CNNM3Q8NE01 707 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 ENGASEQ8NFI3 743 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 STAMQ92783 540 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 ATP6V0A4Q9HBG4 840 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 ALPK3Q96L96 1907 aa11.32□□□□□ -0.6
UPF2-204ENST00000460569 MAGEB2O15479 319 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 TREHO43280 583 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 PQBP1O60828 265 aaKnown RBP11.31□□□□□ -0.6
UPF2-204ENST00000460569 DGAT1O75907 488 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 MBD3O95983 291 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms