RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TRIP12Q14669 1992 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-213ENST00000460211 ABHD14A-ACY1A0A1B0GW23 586 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 DKC1O60832 514 aaKnown RBP eCLIP16.82■□□□□ 0.28
ATG4B-213ENST00000460211 CA3P07451 260 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 KLRC1P26715 233 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 IKBKEQ14164 716 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 FAM26DQ5JW98 314 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 TRAF7Q6Q0C0 670 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 MTHFD1LQ6UB35 978 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 RUFY4Q6ZNE9 571 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
ATG4B-213ENST00000460211 NME8Q8N427 588 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 PHOSPHO2Q8TCD6 241 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 GJA10Q969M2 543 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-213ENST00000460211 NCOR1O75376 2440 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 TRANK1O15050 2925 aa16.82■□□□□ 0.28
ATG4B-213ENST00000460211 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 SMIM35A0A1B0GVV1 85 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 FAM205CA6NFA0 338 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 MAGEB2O15479 319 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 BMP1P13497 986 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 ATP4AP20648 1035 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 GPNMBQ14956 572 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 TRAPPC12Q8WVT3 735 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 SEPT8Q92599 483 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 SLC9A7Q96T83 725 aa16.81■□□□□ 0.28
ATG4B-213ENST00000460211 FAM49AQ9H0Q0 323 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-213ENST00000460211 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 NEMFO60524 1076 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 OATP04181 439 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 ATP2B1P20020 1258 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 PPP2R5CQ13362 524 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 CALCRLQ16602 461 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 B3GNT9Q6UX72 402 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 NOL7Q9UMY1 257 aaKnown RBP16.8■□□□□ 0.28
ATG4B-213ENST00000460211 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
ATG4B-213ENST00000460211 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
ATG4B-213ENST00000460211 GTPBP6O43824 516 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-213ENST00000460211 CD2BP2O95400 341 aaKnown RBP16.79■□□□□ 0.28
ATG4B-213ENST00000460211 CHRNA1P02708 482 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 TMOD1P28289 359 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 PLA2G5P39877 138 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 PSMC5P62195 406 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 MRPS6P82932 125 aaKnown RBP16.79■□□□□ 0.28
ATG4B-213ENST00000460211 PRKCEQ02156 737 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 MBTPS1Q14703 1052 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 PLEKHG4Q58EX7 1191 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 XKR3Q5GH77 459 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 NOSTRINQ8IVI9 506 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 DBF4BQ8NFT6 615 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 ARNTL2Q8WYA1 636 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 HAS1Q92839 578 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 APBB2Q92870 758 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 FAM122AQ96E09 287 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 PCDHA12Q9UN75 941 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 MTCH2Q9Y6C9 303 aa16.79■□□□□ 0.28
ATG4B-213ENST00000460211 H3BQV1 296 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 ARHGEF15O94989 841 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 QARSP47897 775 aaKnown RBP16.78■□□□□ 0.28
ATG4B-213ENST00000460211 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-213ENST00000460211 EPHA7Q15375 998 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 AAK1Q2M2I8 961 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 ZBTB10Q96DT7 871 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 IFIH1Q9BYX4 1025 aaKnown RBP16.78■□□□□ 0.28
ATG4B-213ENST00000460211 VAV3Q9UKW4 847 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 TRPV2Q9Y5S1 764 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 CDY2AQ9Y6F7 541 aa16.78■□□□□ 0.28
ATG4B-213ENST00000460211 DDX11L8A8MPP1 907 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 EML1O00423 815 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 ZNF862O60290 1169 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 P4HBP07237 508 aaKnown RBP16.77■□□□□ 0.28
ATG4B-213ENST00000460211 GHRP10912 638 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 GJB2P29033 226 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 MCM7P33993 719 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 TRAPPC10P48553 1259 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 WDR5P61964 334 aaKnown RBP16.77■□□□□ 0.28
ATG4B-213ENST00000460211 MGAT3Q09327 533 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 UGCGQ16739 394 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 NCAPH2Q6IBW4 605 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 ZNF710Q8N1W2 664 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 ZBED2Q9BTP6 218 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 CELF4Q9BZC1 486 aaKnown RBP16.77■□□□□ 0.28
ATG4B-213ENST00000460211 SQORQ9Y6N5 450 aa16.77■□□□□ 0.28
ATG4B-213ENST00000460211 TANC1Q9C0D5 1861 aa16.77■□□□□ 0.27
ATG4B-213ENST00000460211 C22orf31O95567 290 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 AMHP03971 560 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATG4B-213ENST00000460211 TXKP42681 527 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 TBC1D8BQ0IIM8 1120 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 TTC38Q5R3I4 469 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 ODR4Q5SWX8 454 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 MCTP1Q6DN14 999 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 TSHZ1Q6ZSZ6 1077 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-213ENST00000460211 SPRED2Q7Z698 418 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms