RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 SETD4Q9NVD3 440 aa11.67□□□□□ -0.54
HLA-DQB1-207ENST00000460185 MYH15Q9Y2K3 1946 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 IGKV6D-21A0A0A0MT36 114 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 SLC37A4O43826 429 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 HBP1O60381 514 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 PSMD10O75832 226 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 IQCF3P0C7M6 154 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 CKBP12277 381 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 GJB2P29033 226 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 THPOP40225 353 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 SWSAP1Q6NVH7 229 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 ETNPPLQ8TBG4 499 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 ATP8B4Q8TF62 1192 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 DDX12PQ92771 950 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 SCLYQ96I15 445 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 UIMC1Q96RL1 719 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 KCNMB3Q9NPA1 279 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 RABGEF1Q9UJ41 708 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 TELO2Q9Y4R8 837 aa11.66□□□□□ -0.54
HLA-DQB1-207ENST00000460185 TET1Q8NFU7 2136 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 M0QZ92 97 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 TREHO43280 583 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 FGBP02675 491 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 INSRRP14616 1297 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 PDCP20941 246 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 TRAPPC10P48553 1259 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 IGBP1P78318 339 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 PLCB4Q15147 1175 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 SHHQ15465 462 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 CALCRLQ16602 461 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 ZNF484Q5JVG2 852 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 PCYT2Q99447 389 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 UNC45AQ9H3U1 944 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 GABBR1Q9UBS5 961 aa11.65□□□□□ -0.54
HLA-DQB1-207ENST00000460185 ZBBXA8MT70 800 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 RSPH10B2B2RC85 870 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 K7ELQ4 463 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 EFCAB14O75071 495 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 BAIAP3O94812 1187 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 OATP04181 439 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 RSPH10BP0C881 870 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 ACRP10323 421 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 PRKCEQ02156 737 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 EARS2Q5JPH6 523 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 C9orf50Q5SZB4 431 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 MCTP1Q6DN14 999 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 DEFB128Q7Z7B8 93 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 DHX38Q92620 1227 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 CTAGE1Q96RT6 745 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 NRBP2Q9NSY0 501 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 MAFBQ9Y5Q3 323 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 LAMA3Q16787 3333 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 PTPRSQ13332 1948 aa11.64□□□□□ -0.55
HLA-DQB1-207ENST00000460185 MBLAC1A4D2B0 266 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 EDIL3O43854 480 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 CTSHP09668 335 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 ATP2B1P20020 1258 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 KCNJ6P48051 423 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 FXR1P51114 621 aaKnown RBP eCLIP11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 EPHB4P54760 987 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 ADAM17P78536 824 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 TMEM266Q2M3C6 531 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 TTC38Q5R3I4 469 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 TMEM240Q5SV17 173 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 ZNF618Q5T7W0 954 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 IER5Q5VY09 327 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 CNKSR3Q6P9H4 555 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 ZNF365Q70YC5 407 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 RPAINQ86UA6 219 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 NEK9Q8TD19 979 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 HERVK_113Q902F9 699 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 CCDC43Q96MW1 224 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
HLA-DQB1-207ENST00000460185 SMIM35A0A1B0GVV1 85 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 MAGEB2O15479 319 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 U2AF2P26368 475 aaKnown RBP eCLIP11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 TMOD1P28289 359 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 MCM7P33993 719 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 PSMC5P62195 406 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 CUL4AQ13619 759 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 HIC1Q14526 733 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 TRIM71Q2Q1W2 868 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 RILPL1Q5EBL4 403 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 XKR3Q5GH77 459 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 NCAPH2Q6IBW4 605 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 B3GNT9Q6UX72 402 aa11.62□□□□□ -0.55
HLA-DQB1-207ENST00000460185 OTOP2Q7RTS6 562 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms