RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 FBXO11Q86XK2 927 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 CNPY4Q8N129 248 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 RAET1EQ8TD07 263 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 CAVIN3Q969G5 261 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 RRP36Q96EU6 259 aaKnown RBP17.36■□□□□ 0.37
CMTM3-203ENST00000460097 EPSTI1Q96J88 318 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 PIGSQ96S52 555 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 MMP19Q99542 508 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 ACAD9Q9H845 621 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 RNF146Q9NTX7 359 aa17.36■□□□□ 0.37
CMTM3-203ENST00000460097 PNMA6FA0A0J9YX94 578 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 KCNB1Q14721 858 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 USH1GQ495M9 461 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 FBXO46Q6PJ61 603 aaPredicted RBP17.35■□□□□ 0.37
CMTM3-203ENST00000460097 MICALL1Q8N3F8 863 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 NELFBQ8WX92 580 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 TNFRSF25Q93038 417 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 CHP1Q99653 195 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 AMNQ9BXJ7 453 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 ZNHIT6Q9NWK9 470 aaKnown RBP17.35■□□□□ 0.37
CMTM3-203ENST00000460097 GRIN2DO15399 1336 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 BAZ2BQ9UIF8 2168 aaKnown RBP17.35■□□□□ 0.37
CMTM3-203ENST00000460097 TTC26A0AVF1 554 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 ADORA2AP29274 412 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 DNM2P50570 870 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 UBXN1Q04323 297 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 MAP2K5Q13163 448 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 IRF5Q13568 498 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 ANKRD35Q8N283 1001 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 CCDC155Q8N6L0 562 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 OXER1Q8TDS5 423 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 USP6NLQ92738 828 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 TTYH3Q9C0H2 523 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 MCOLN1Q9GZU1 580 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 TAB2Q9NYJ8 693 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 SEC63Q9UGP8 760 aaKnown RBP17.35■□□□□ 0.37
CMTM3-203ENST00000460097 PTCH2Q9Y6C5 1203 aa17.35■□□□□ 0.37
CMTM3-203ENST00000460097 A0A1W2PQJ5 194 aa17.34■□□□□ 0.37
CMTM3-203ENST00000460097 IPO7O95373 1038 aaKnown RBP17.34■□□□□ 0.37
CMTM3-203ENST00000460097 CHRM1P11229 460 aaPredicted RBP17.34■□□□□ 0.37
CMTM3-203ENST00000460097 TAL1P17542 331 aaPredicted RBP17.34■□□□□ 0.37
CMTM3-203ENST00000460097 CYP2B6P20813 491 aa17.34■□□□□ 0.37
CMTM3-203ENST00000460097 RGS2P41220 211 aa17.34■□□□□ 0.37
CMTM3-203ENST00000460097 TRAF1Q13077 416 aa17.34■□□□□ 0.37
CMTM3-203ENST00000460097 GLE1Q53GS7 698 aaKnown RBP17.34■□□□□ 0.37
CMTM3-203ENST00000460097 ARL6IP4Q66PJ3 421 aaKnown RBP17.34■□□□□ 0.37
CMTM3-203ENST00000460097 WDR59Q6PJI9 974 aa17.34■□□□□ 0.37
CMTM3-203ENST00000460097 VPS16Q9H269 839 aa17.34■□□□□ 0.37
CMTM3-203ENST00000460097 XRCC5P13010 732 aaKnown RBP17.33■□□□□ 0.37
CMTM3-203ENST00000460097 EPHB4P54760 987 aa17.33■□□□□ 0.37
CMTM3-203ENST00000460097 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.37
CMTM3-203ENST00000460097 ADSSL1Q8N142 457 aa17.33■□□□□ 0.37
CMTM3-203ENST00000460097 TRIM58Q8NG06 486 aa17.33■□□□□ 0.37
CMTM3-203ENST00000460097 DRC1Q96MC2 740 aa17.33■□□□□ 0.37
CMTM3-203ENST00000460097 SLC5A4Q9NY91 659 aa17.33■□□□□ 0.37
CMTM3-203ENST00000460097 PCDHA1Q9Y5I3 950 aa17.33■□□□□ 0.37
CMTM3-203ENST00000460097 ABCB11O95342 1321 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 PPP1R11O60927 126 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-203ENST00000460097 FSBPO95073 299 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 CCT5P48643 541 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 ZBED6P86452 979 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 FUT2Q10981 343 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 IRF2BP1Q8IU81 584 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 CLEC4DQ8WXI8 215 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 SNX12Q9UMY4 172 aa17.33■□□□□ 0.36
CMTM3-203ENST00000460097 MRPL11Q9Y3B7 192 aaKnown RBP17.33■□□□□ 0.36
CMTM3-203ENST00000460097 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-203ENST00000460097 ADCY3O60266 1144 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 COBLO75128 1261 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 RPN1P04843 607 aaKnown RBP17.32■□□□□ 0.36
CMTM3-203ENST00000460097 HOXC6P09630 235 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 CDC25AP30304 524 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 HNRNPH3P31942 346 aaKnown RBP17.32■□□□□ 0.36
CMTM3-203ENST00000460097 HNRNPH1P31943 449 aaKnown RBP17.32■□□□□ 0.36
CMTM3-203ENST00000460097 PPP1R2P41236 205 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 VAV2P52735 878 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 PKN1Q16512 942 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 MICALCLQ6ZW33 695 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 KIAA1328Q86T90 577 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 TEX2Q8IWB9 1127 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 SMYD4Q8IYR2 804 aaPredicted RBP17.32■□□□□ 0.36
CMTM3-203ENST00000460097 BCAS4Q8TDM0 211 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 HDAC6Q9UBN7 1215 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 RNF14Q9UBS8 474 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 HTTP42858 3142 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 SMCHD1A6NHR9 2005 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 CENPFP49454 3210 aa17.32■□□□□ 0.36
CMTM3-203ENST00000460097 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
CMTM3-203ENST00000460097 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
CMTM3-203ENST00000460097 NFIBO00712 420 aa17.31■□□□□ 0.36
CMTM3-203ENST00000460097 PGK2P07205 417 aa17.31■□□□□ 0.36
CMTM3-203ENST00000460097 TCP1P17987 556 aaKnown RBP17.31■□□□□ 0.36
CMTM3-203ENST00000460097 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
CMTM3-203ENST00000460097 PLCB4Q15147 1175 aa17.31■□□□□ 0.36
CMTM3-203ENST00000460097 NSMFQ6X4W1 530 aa17.31■□□□□ 0.36
CMTM3-203ENST00000460097 CREG2Q8IUH2 290 aa17.31■□□□□ 0.36
CMTM3-203ENST00000460097 CAGE1Q8TC20 777 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms