RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 UBE2OQ9C0C9 1292 aaKnown RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 NRBP2Q9NSY0 501 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 WRAP73Q9P2S5 460 aaPredicted RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 BRD1O95696 1058 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 F13A1P00488 732 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 SPATA31C1P0DKV0 1188 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 RAG1P15918 1043 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 CYP2C18P33260 490 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 PTK7Q13308 1070 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 CTTNQ14247 550 aaKnown RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 TARBP2Q15633 366 aaKnown RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 TRIM71Q2Q1W2 868 aaKnown RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 XKR3Q5GH77 459 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 ZNF484Q5JVG2 852 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 ARL6IP4Q66PJ3 421 aaKnown RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 TMEM92Q6UXU6 159 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 Q7L0L9 218 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 TRMT1LQ7Z2T5 733 aaKnown RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 C4orf19Q8IY42 314 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 CKAP2LQ8IYA6 745 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 TDHQ8IZJ6 230 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 SLC17A8Q8NDX2 589 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 TRAPPC12Q8WVT3 735 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 FTOQ9C0B1 505 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATG4A-206ENST00000457035 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 NOD1Q9Y239 953 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 CLIC4Q9Y696 253 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
ATG4A-206ENST00000457035 MYO9BQ13459 2157 aa11.27□□□□□ -0.6
ATG4A-206ENST00000457035 ZBTB39O15060 712 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 LYPLA2O95372 231 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 BMP15O95972 392 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 OATP04181 439 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 KLRC1P26715 233 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 DDIT3P35638 169 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 IGBP1P78318 339 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 PRKCEQ02156 737 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 RBL2Q08999 1139 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 MFSD5Q6N075 450 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 MTHFD1LQ6UB35 978 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 ANO5Q75V66 913 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 RPAINQ86UA6 219 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 CATSPER3Q86XQ3 398 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 TPH2Q8IWU9 490 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 CAGE1Q8TC20 777 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 BADQ92934 168 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 ZBTB10Q96DT7 871 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 USP28Q96RU2 1077 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 LXNQ9BS40 222 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 POLR3CQ9BUI4 534 aaPredicted RBP11.27□□□□□ -0.61
ATG4A-206ENST00000457035 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 HIPK3Q9H422 1215 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 ZSWIM4Q9H7M6 989 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 LRWD1Q9UFC0 647 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 COL1A2P08123 1366 aa11.27□□□□□ -0.61
ATG4A-206ENST00000457035 TMEM150BA6NC51 233 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 DKC1O60832 514 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATG4A-206ENST00000457035 MED24O75448 989 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 IQCF3P0C7M6 154 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 CKBP12277 381 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 XRCC6P12956 609 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATG4A-206ENST00000457035 RPA1P27694 616 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 CDC25AP30304 524 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 NASPP49321 788 aaPredicted RBP11.26□□□□□ -0.61
ATG4A-206ENST00000457035 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 BFSP2Q13515 415 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 GPNMBQ14956 572 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 SLC39A14Q15043 492 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 ECM1Q16610 540 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 RUFY4Q6ZNE9 571 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 DEFB123Q8N688 67 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 NEK9Q8TD19 979 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 VWCEQ96DN2 955 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 MMTAG2Q9BU76 263 aaKnown RBP11.26□□□□□ -0.61
ATG4A-206ENST00000457035 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 TUFT1Q9NNX1 390 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
ATG4A-206ENST00000457035 TUBE1Q9UJT0 475 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 CEP131Q9UPN4 1083 aa11.26□□□□□ -0.61
ATG4A-206ENST00000457035 MORC2Q9Y6X9 1032 aaPredicted RBP11.26□□□□□ -0.61
ATG4A-206ENST00000457035 ARID2Q68CP9 1835 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 A0A087WWV3 80 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 SMIM35A0A1B0GVV1 85 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 VWA3AA6NCI4 1184 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 PP2D1A8MPX8 630 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 MAGEB2O15479 319 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 C22orf31O95567 290 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms