RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PABPC3Q9H361 631 aaKnown RBP11.21□□□□□ -0.62
CLIP4-208ENST00000456385 OSGEPQ9NPF4 335 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 PRDM11Q9NQV5 511 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 STK17AQ9UEE5 414 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 PNMA3Q9UL41 463 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 SNX24Q9Y343 169 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 NPHP3-ACAD11A0A0J9YXS1 232 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 KLRF2D3W0D1 207 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SNX3O60493 162 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 TDP2O95551 362 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 NUDT17P0C025 328 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 UCHL3P15374 230 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 KLRK1P26718 216 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 PRDX5P30044 214 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 DR1Q01658 176 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 KLRC3Q07444 240 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 IFI16Q16666 785 aaKnown RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 DENND2CQ68D51 928 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SLFN11Q7Z7L1 901 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SLC44A5Q8NCS7 719 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 ZBTB10Q96DT7 871 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 PGM2Q96G03 612 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SEMA4AQ9H3S1 761 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SPATS2LQ9NUQ6 558 aaKnown RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 DBR1Q9UK59 544 aaKnown RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 RTCBQ9Y3I0 505 aaKnown RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 EDIL3O43854 480 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 ADAMTS2O95450 1211 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 CALRP27797 417 aaKnown RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 ABL2P42684 1182 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 ZNF211Q13398 564 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 ADAM9Q13443 819 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 FAM26FQ5R3K3 315 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 DUPD1Q68J44 220 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 MGARPQ8TDB4 240 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 HES6Q96HZ4 224 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 FAM84BQ96KN1 310 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 YIPF3Q9GZM5 350 aa11.2□□□□□ -0.62
CLIP4-208ENST00000456385 SUCLA2Q9P2R7 463 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 AJAP1Q9UKB5 411 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-208ENST00000456385 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-208ENST00000456385 CCDC169A6NNP5 214 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 GNAQP50148 359 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 PSMD2Q13200 908 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ANKRD20A2Q5SQ80 823 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 C10orf76Q5T2E6 689 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 THEMIS2Q5TEJ8 643 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ANKRD20A1Q5TYW2 823 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ANKRD20A3Q5VUR7 823 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 KLHL29Q96CT2 875 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 TMEM47Q9BQJ4 181 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ERP44Q9BS26 406 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 MLXIPLQ9NP71 852 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 FGFR1OP2Q9NVK5 253 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ARPP21Q9UBL0 812 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-208ENST00000456385 PPP1R9AQ9ULJ8 1098 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 RPTORQ8N122 1335 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 NHSL1Q5SYE7 1610 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 A0A1B0GUL6 1792 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 FOXO6A8MYZ6 492 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 FGFR4P22455 802 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 CCND1P24385 295 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 PTENP60484 403 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 CNGA2Q16280 664 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 GALNTL6Q49A17 601 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 AADACL2Q6P093 401 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 GJB7Q6PEY0 223 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ZDHHC24Q6UX98 284 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 OTUD6AQ7L8S5 288 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 CEP120Q8N960 986 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 COL22A1Q8NFW1 1626 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-208ENST00000456385 SCFD1Q8WVM8 642 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 RREB1Q92766 1687 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 RAB17Q9H0T7 212 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ATP8A2Q9NTI2 1148 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 ADAM22Q9P0K1 906 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 DAAM1Q9Y4D1 1078 aa11.19□□□□□ -0.62
CLIP4-208ENST00000456385 NUP98P52948 1817 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 TCP11X1B4DZS4 312 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 DDX3XO00571 662 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 EVI5O60447 810 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 FLOT1O75955 427 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 OAS1P00973 400 aaKnown RBP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 TSPY3P0CV98 308 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 TSPY8P0CW00 308 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 MYBL1P10243 752 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 CREB1P16220 341 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 GNA11P29992 359 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 MSH2P43246 934 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 COPS2P61201 443 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms