RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 GTF2BQ00403 316 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 KCTD2Q14681 263 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 UGCGQ16739 394 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 FILIP1LQ4L180 1135 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 FIGNQ5HY92 759 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 MIIPQ5JXC2 388 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 CELF3Q5SZQ8 465 aaKnown RBP8.29□□□□□ -1.08
ERCC3-204ENST00000456257 ARMCX5Q6P1M9 558 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 METTL7BQ6UX53 244 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 SFR1Q86XK3 245 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 RASAL3Q86YV0 1011 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 C12orf56Q8IXR9 622 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 SPC24Q8NBT2 197 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 CCDC150Q8NCX0 1101 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 SLC17A8Q8NDX2 589 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 SPIRE2Q8WWL2 714 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 USP6NLQ92738 828 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 ATP6V0A1Q93050 837 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 EMID1Q96A84 441 aaPredicted RBP8.29□□□□□ -1.08
ERCC3-204ENST00000456257 IQCDQ96DY2 449 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 PANX2Q96RD6 677 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 PCYT2Q99447 389 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 MPHOSPH6Q99547 160 aaKnown RBP8.29□□□□□ -1.08
ERCC3-204ENST00000456257 PAGR1Q9BTK6 254 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 EDEM3Q9BZQ6 932 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 KCNG1Q9UIX4 513 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 PCDHB13Q9Y5F0 798 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 TLL2Q9Y6L7 1015 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 LCTP09848 1927 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 IGSF9BQ9UPX0 1349 aa8.29□□□□□ -1.08
ERCC3-204ENST00000456257 RASSF10A6NK89 507 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 RSPH10B2B2RC85 870 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 SSBP05455 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 PTMAP06454 111 aaKnown RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 RSPH10BP0C881 870 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 PLS3P13797 630 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 UBA1P22314 1058 aaKnown RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 CASP5P51878 434 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 HUNKP57058 714 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 CCZ1BP86790 482 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 CCZ1P86791 482 aaPredicted RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 GRB14Q14449 540 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 LRRC41Q15345 812 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TPD52L1Q16890 204 aaPredicted RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 MORN1Q5T089 497 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 SWSAP1Q6NVH7 229 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 RGMBQ6NW40 437 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TAPT1Q6NXT6 567 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 MIS18BP1Q6P0N0 1132 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 C17orf99Q6UX52 265 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 PLPPR4Q7Z2D5 763 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 FRMD5Q7Z6J6 570 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TMEM139Q8IV31 216 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TRIM59Q8IWR1 403 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TC2NQ8N9U0 490 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 BANK1Q8NDB2 785 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 ANKRD20A12PQ8NF67 263 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 SEPT1Q8WYJ6 367 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 CCDC102AQ96A19 550 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 HVCN1Q96D96 273 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TRIM47Q96LD4 638 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 PARK7Q99497 189 aaKnown RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TUBGCP2Q9BSJ2 902 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 DHX33Q9H6R0 707 aaKnown RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 EFCC1Q9HA90 598 aa8.28□□□□□ -1.08
ERCC3-204ENST00000456257 RRAGDQ9NQL2 400 aaPredicted RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 TYW1Q9NV66 732 aaKnown RBP8.28□□□□□ -1.08
ERCC3-204ENST00000456257 SFI1A8K8P3 1242 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 KIF3CO14782 793 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 N4BP3O15049 544 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 MAPK13O15264 365 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 CHMP2AO43633 222 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 STX10O60499 249 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 HIP1RO75146 1068 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 FAM13AO94988 1023 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 SNAI1O95863 264 aaPredicted RBP8.27□□□□□ -1.09
ERCC3-204ENST00000456257 SLC10A3P09131 477 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 HNRNPH3P31942 346 aaKnown RBP8.27□□□□□ -1.09
ERCC3-204ENST00000456257 ABCD1P33897 745 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 SLC26A2P50443 739 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 NCKAP1LP55160 1127 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 ENPEPQ07075 957 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 TRIM14Q14142 442 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 STXBP4Q6ZWJ1 553 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 CYFIP1Q7L576 1253 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 TMC6Q7Z403 805 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 CCDC60Q8IWA6 550 aaPredicted RBP8.27□□□□□ -1.09
ERCC3-204ENST00000456257 DRC7Q8IY82 874 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 MCPH1Q8NEM0 835 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 GOLGA5Q8TBA6 731 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 SCFD2Q8WU76 684 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 KIFAP3Q92845 792 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 CCDC51Q96ER9 411 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
ERCC3-204ENST00000456257 TSG101Q99816 390 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 MKNK1Q9BUB5 465 aa8.27□□□□□ -1.09
ERCC3-204ENST00000456257 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms