RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 KRT76Q01546 638 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 COASYQ13057 564 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 ADAM15Q13444 863 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 CEP55Q53EZ4 464 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 MCTP2Q6DN12 878 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 NIPA1Q7RTP0 329 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 SGMS1Q86VZ5 419 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 CDCA3Q99618 268 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 IGFLR1Q9H665 355 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 AGO3Q9H9G7 860 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 KCNH7Q9NS40 1196 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 PKD2L1Q9P0L9 805 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 PADI3Q9ULW8 664 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 TELO2Q9Y4R8 837 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 PCDHB7Q9Y5E2 793 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 TAF6LQ9Y6J9 622 aa9.15□□□□□ -0.94
NIF3L1-209ENST00000454952 EVPLQ92817 2033 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 GPR182O15218 404 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 HBP1O60381 514 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 TBX10O75333 385 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 ITGB1P05556 798 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 SARSP49591 514 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 ADCY7P51828 1080 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 NAPAP54920 295 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 PLCB4Q15147 1175 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 UBE2SQ16763 222 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 MTHFD1LQ6UB35 978 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 MICU3Q86XE3 530 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 CRIPAKQ8N1N5 446 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 KLHL23Q8NBE8 558 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 SPPL3Q8TCT6 385 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 EDAQ92838 391 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 RIC8AQ9NPQ8 531 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 TCEAL9Q9UHQ7 104 aa9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 SUPT16HQ9Y5B9 1047 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-209ENST00000454952 FNDC1Q4ZHG4 1894 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 DENND3A2RUS2 1198 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 MEIS1O00470 390 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 BACH1O14867 736 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 SLC27A2O14975 620 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 HOXA2O43364 376 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 RPS6KA5O75582 802 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 ATG7O95352 703 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 ZNF76P36508 570 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 SREBF1P36956 1147 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 NHLH1Q02575 133 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 DLX2Q07687 328 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 NFX1Q12986 1120 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 CLUL1Q15846 466 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 PAN2Q504Q3 1202 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 ZNF484Q5JVG2 852 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 SPOUT1Q5T280 376 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 SLC24A5Q71RS6 500 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 BMP8AQ7Z5Y6 402 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 ALYREFQ86V81 257 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 CMTR1Q8N1G2 835 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 SMRP1Q8NCR6 262 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 MICAL1Q8TDZ2 1067 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 ATP8B4Q8TF62 1192 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 POF1BQ8WVV4 589 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 LINC01599Q8WXQ3 324 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 MSLNLQ96KJ4 702 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 PCYT2Q99447 389 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 TLE6Q9H808 572 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 AGO4Q9HCK5 861 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 PUF60Q9UHX1 559 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 MUTYHQ9UIF7 546 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 CEP131Q9UPN4 1083 aa9.13□□□□□ -0.95
NIF3L1-209ENST00000454952 TECTAO75443 2155 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 IGKV6D-21A0A0A0MT36 114 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 CCDC196A0A1B0GTZ2 297 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ZBTB43O43298 467 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 LAG3P18627 525 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 RXRAP19793 462 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 KLRC1P26715 233 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 NRIP1P48552 1158 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 MRE11P49959 708 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 CRYBB1P53674 252 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 RCAN1P53805 252 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 SETQ01105 290 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 TMEM62Q0P6H9 643 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 CAMK1Q14012 370 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 DSG2Q14126 1118 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 RTN1Q16799 776 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 CREB3L3Q68CJ9 461 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 WWC2Q6AWC2 1192 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 APOA5Q6Q788 366 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 HFE2Q6ZVN8 426 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 RTN4RL1Q86UN2 441 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 SUGP1Q8IWZ8 645 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 CCDC82Q8N4S0 544 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms