RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SSBP05455 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SUPT20HL2P0C7V6 817 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 MYCLP12524 364 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 CASP1P29466 404 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 MAPK4P31152 587 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 YWHABP31946 246 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 RARRES1P49788 294 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SMTNP53814 917 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 PLS1Q14651 629 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 FAM110CQ1W6H9 321 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 TSR1Q2NL82 804 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 CHADLQ6NUI6 762 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 METTL7BQ6UX53 244 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 ABHD15Q6UXT9 468 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 HS2ST1Q7LGA3 356 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 DYMQ7RTS9 669 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 TMTC1Q8IUR5 882 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 TRMT44Q8IYL2 757 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 TXLNBQ8N3L3 684 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SPC24Q8NBT2 197 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 ZNF397Q8NF99 534 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SCFD1Q8WVM8 642 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SYN2Q92777 582 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 EMID1Q96A84 441 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 CLMNQ96JQ2 1002 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 CNOT6LQ96LI5 555 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 NAP1L5Q96NT1 182 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 MMP19Q99542 508 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SEMA6BQ9H3T3 888 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC39A2Q9NP94 309 aa7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SCAF8Q9UPN6 1271 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-210ENST00000454859 SIP14410 1827 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 OFD1O75665 1012 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 PPP1R37O75864 691 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 SKILP12757 684 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 PLS3P13797 630 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 ERCC3P19447 782 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 ANXA13P27216 316 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 NOLC1Q14978 699 aaKnown RBP eCLIP7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 PPP2R5AQ15172 486 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 PADI6Q6TGC4 694 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 MAMDC4Q6UXC1 1216 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 ZNF662Q6ZS27 426 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 LRRC55Q6ZSA7 311 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 ZNF720Q7Z2F6 126 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 NCAPG2Q86XI2 1143 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 FAM178BQ8IXR5 827 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 SMYD4Q8IYR2 804 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 ZNF710Q8N1W2 664 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 MRPL44Q9H9J2 332 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 NRBP2Q9NSY0 501 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 INTS13Q9NVM9 706 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 RGL1Q9NZL6 768 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 FBXL5Q9UKA1 691 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 MAFBQ9Y5Q3 323 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 EMSYQ7Z589 1322 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 SYNGAP1Q96PV0 1343 aa7.54□□□□□ -1.2
ECHDC1-210ENST00000454859 A0A087WWV3 80 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC15A5A6NIM6 579 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 P4HA2O15460 535 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 LGR5O75473 907 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 RFX1P22670 979 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 HNRNPH3P31942 346 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 MTIF2P46199 727 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 STX17P56962 302 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 PSMC6P62333 389 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CCZ1BP86790 482 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CCZ1P86791 482 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CTTNQ14247 550 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 VWA3BQ502W6 1294 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 PLPPR4Q7Z2D5 763 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 USP37Q86T82 979 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 SCFD2Q8WU76 684 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 UBE2Q2Q8WVN8 375 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 ACCSQ96QU6 501 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 NOC4LQ9BVI4 516 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 KCNF1Q9H3M0 494 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CAPN11Q9UMQ6 739 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 SAMM50Q9Y512 469 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 ATP8B3O60423 1300 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CCL15-CCL14A0A0B4J2E2 113 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 N4BP1O75113 896 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 RGS20O76081 388 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 ACTR2P61160 394 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 GTF2BQ00403 316 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CYP4A11Q02928 519 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 UBXN1Q04323 297 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 PRKG1Q13976 671 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CCL15Q16663 113 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CCDC144BQ3MJ40 725 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 SFR1Q86XK3 245 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 MYCT1Q8N699 235 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 SEPT1Q8WYJ6 367 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 CCDC102AQ96A19 550 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 RUSC1Q9BVN2 902 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 KIAA1586Q9HCI6 787 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
ECHDC1-210ENST00000454859 NRBP1Q9UHY1 535 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms