RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 CCNE1P24864 410 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 GUCY2DQ02846 1103 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 SF3A3Q12874 501 aaKnown RBP eCLIP14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 ACBD5Q5T8D3 534 aaPredicted RBP14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 TYW1BQ6NUM6 668 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 ARHGAP27Q6ZUM4 889 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 BLIDQ8IZY5 108 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 NEDD1Q8NHV4 660 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 TMEM47Q9BQJ4 181 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 BLZF1Q9H2G9 400 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 SAP30BPQ9UHR5 308 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 PLCG2P16885 1265 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 USP49Q70CQ1 688 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 ADSSL1Q8N142 457 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 TAF4BQ92750 862 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 TUBGCP2Q9BSJ2 902 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 EDEM3Q9BZQ6 932 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 EHD2Q9NZN4 543 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 A0A087X0B3 334 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAP3K13O43283 966 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 COBLO75128 1261 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 NPTXRO95502 500 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 APBA3O96018 575 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 DRD4P21917 467 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 ORC2Q13416 577 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 SOGA3Q5TF21 947 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 DISC1Q9NRI5 854 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 PSME4Q14997 1843 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 TTC26A0AVF1 554 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 PPP2R2AP63151 447 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 CACNA2D4Q7Z3S7 1137 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 SMYD4Q8IYR2 804 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 FLAD1Q8NFF5 587 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 PCMTD2Q9NV79 361 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 DNAAF2Q9NVR5 837 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 ZSCAN5CA6NGD5 496 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 F8W031 263 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 C6orf229H3BNL8 230 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 CREB3O43889 395 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 NQO1P15559 274 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 KCNJ2P63252 427 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 GTF2IP78347 998 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 TRIM42Q8IWZ5 723 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 SYCP3Q8IZU3 236 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 C4orf32Q8N8J7 132 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 KCNV2Q8TDN2 545 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 DTNBP1Q96EV8 351 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 BICD1Q96G01 975 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 NOX5Q96PH1 765 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 IFIH1Q9BYX4 1025 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 ARHGEF10LQ9HCE6 1279 aa14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-204ENST00000449372 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 HEXIM1O94992 359 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 MMP10P09238 476 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 ALDH5A1P51649 535 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 MRPS35P82673 323 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 CFAP221Q4G0U5 840 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 APLFQ8IW19 511 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 LMNTD2Q8IXW0 634 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 CCSER1Q9C0I3 900 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 MKNK2Q9HBH9 465 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 KCNMB3Q9NPA1 279 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 GDF3Q9NR23 364 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 ASB3Q9Y575 518 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 TSPY3P0CV98 308 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 TSPY8P0CW00 308 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 TMEM266Q2M3C6 531 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 ANO7Q6IWH7 933 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 SLF2Q8IX21 1173 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 P2RX5Q93086 422 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 MASTLQ96GX5 879 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 NHEJ1Q9H9Q4 299 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 SWAP70Q9UH65 585 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 GOLGA6L10A0A0M3HER8 536 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 POLD1P28340 1107 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 TUBP50607 506 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 ASIC1P78348 528 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 DYNC1I2Q13409 638 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 IL17AQ16552 155 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 MEA1Q16626 185 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 NFRKBQ6P4R8 1299 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 KRT25Q7Z3Z0 450 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 KIAA0825Q8IV33 1275 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 DAGLBQ8NCG7 672 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 CHMP6Q96FZ7 201 aa14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 MOV10L1Q9BXT6 1211 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 UBE2OQ9C0C9 1292 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 DDX4Q9NQI0 724 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 BMP2KQ9NSY1 1161 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-204ENST00000449372 PDHA1P08559 390 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 PCK1P35558 622 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 PRCPP42785 496 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 TNNC1P63316 161 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 SMCR8Q8TEV9 937 aaPredicted RBP14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 WHAMMQ8TF30 809 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 RMI1Q9H9A7 625 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms