RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 GUCD1Q96NT3 240 aa11.92□□□□□ -0.5
SMPD4-211ENST00000449159 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
SMPD4-211ENST00000449159 SEPT9Q9UHD8 586 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-211ENST00000449159 TUBE1Q9UJT0 475 aa11.92□□□□□ -0.5
SMPD4-211ENST00000449159 CEP131Q9UPN4 1083 aa11.92□□□□□ -0.5
SMPD4-211ENST00000449159 NOD1Q9Y239 953 aa11.92□□□□□ -0.5
SMPD4-211ENST00000449159 KIAA0355O15063 1070 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 BMP15O95972 392 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 CYP2C18P33260 490 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 PDIA5Q14554 519 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 SLC39A14Q15043 492 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 STK38Q15208 465 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 ECM1Q16610 540 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 XKR3Q5GH77 459 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 SERINC5Q86VE9 423 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 CATSPER3Q86XQ3 398 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
SMPD4-211ENST00000449159 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 ERMNQ8TAM6 284 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 SNX29Q8TEQ0 813 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-211ENST00000449159 CLIC6Q96NY7 704 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 MMTAG2Q9BU76 263 aaKnown RBP11.91□□□□□ -0.5
SMPD4-211ENST00000449159 PPP1R12CQ9BZL4 782 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 FBXO2Q9UK22 296 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-211ENST00000449159 COL1A2P08123 1366 aa11.91□□□□□ -0.5
SMPD4-211ENST00000449159 MBLAC1A4D2B0 266 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-211ENST00000449159 RRN3P2A6NIE6 340 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 C22orf31O95567 290 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 GNAT1P11488 350 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.5
SMPD4-211ENST00000449159 CCT6AP40227 531 aaKnown RBP11.9□□□□□ -0.5
SMPD4-211ENST00000449159 NPEPPSP55786 919 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 TARBP2Q15633 366 aaKnown RBP11.9□□□□□ -0.5
SMPD4-211ENST00000449159 TRIM71Q2Q1W2 868 aaKnown RBP11.9□□□□□ -0.5
SMPD4-211ENST00000449159 MTERF2Q49AM1 385 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 ZNF484Q5JVG2 852 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 C4orf19Q8IY42 314 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 NEK9Q8TD19 979 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 FAM161BQ96MY7 647 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 CEP89Q96ST8 783 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 POLR3CQ9BUI4 534 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-211ENST00000449159 RAB34Q9BZG1 259 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 FAM49AQ9H0Q0 323 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-211ENST00000449159 CSRNP2Q9H175 543 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 WNT8AQ9H1J5 351 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 HIPK3Q9H422 1215 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 NRBP2Q9NSY0 501 aa11.9□□□□□ -0.5
SMPD4-211ENST00000449159 MUC3AQ02505 3323 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 SPTLC2O15270 562 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 LYPLA2O95372 231 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 YEATS4O95619 227 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 CTSHP09668 335 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 RAG1P15918 1043 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 NCLP19338 710 aaKnown RBP11.89□□□□□ -0.51
SMPD4-211ENST00000449159 KLRC1P26715 233 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 RPA1P27694 616 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 CCL23P55773 120 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 NUCB2P80303 420 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 PTK7Q13308 1070 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
SMPD4-211ENST00000449159 SPECC1Q5M775 1068 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 USP49Q70CQ1 688 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 COL25A1Q9BXS0 654 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-211ENST00000449159 NIFKQ9BYG3 293 aaKnown RBP11.89□□□□□ -0.51
SMPD4-211ENST00000449159 TUFT1Q9NNX1 390 aa11.89□□□□□ -0.51
SMPD4-211ENST00000449159 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-211ENST00000449159 SRPRBQ9Y5M8 271 aaKnown RBP11.89□□□□□ -0.51
SMPD4-211ENST00000449159 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMPD4-211ENST00000449159 TIMP1P01033 207 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 CKBP12277 381 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 LONP1P36776 959 aaKnown RBP11.88□□□□□ -0.51
SMPD4-211ENST00000449159 THPOP40225 353 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 CLCN3P51790 818 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 TBC1D8BQ0IIM8 1120 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 TMEM62Q0P6H9 643 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 GRB10Q13322 594 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 DRP2Q13474 957 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 KRT79Q5XKE5 535 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 TRAF7Q6Q0C0 670 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 LRRC71Q8N4P6 559 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 METTL13Q8N6R0 699 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
SMPD4-211ENST00000449159 LRRC15Q8TF66 581 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 DNAJB3Q8WWF6 145 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 BADQ92934 168 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 TNPO1Q92973 898 aaKnown RBP11.88□□□□□ -0.51
SMPD4-211ENST00000449159 SCLYQ96I15 445 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 AK8Q96MA6 479 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 PNMA5Q96PV4 448 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 PLIN2Q99541 437 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 CYP26B1Q9NR63 512 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 DDX19AQ9NUU7 478 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms