RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 MOXD2PA6NHM9 499 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 H3BRB1 525 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 P4HBP07237 508 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 EPB41P11171 864 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 MCM4P33991 863 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 ACTN2P35609 894 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TLE2Q04725 743 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 INAVAQ3KP66 663 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 BROXQ5VW32 411 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCDC149Q6ZUS6 474 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TBCKQ8TEA7 893 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 CPVLQ9H3G5 476 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TUT1Q9H6E5 874 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 HSPA8P11142 646 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 GNSP15586 552 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 FGFR2P21802 821 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TTBK2Q6IQ55 1244 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 APOA5Q6Q788 366 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 STN1Q9H668 368 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 AKAP11Q9UKA4 1901 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 H0YGN5 161 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 PPFIA4O75335 1185 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 WEE1P30291 646 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 BEX3Q00994 111 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 SLC45A4Q5BKX6 768 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 ADALQ6DHV7 355 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 SKA2Q8WVK7 121 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 MRPL9Q9BYD2 267 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TFIP11Q9UBB9 837 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 FAM198AQ9UFP1 575 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 CNTNAP1P78357 1384 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 CXCL14O95715 111 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TGFB3P10600 412 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 ITGA4P13612 1032 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TNNT1P13805 278 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 SYKP43405 635 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 BPIFB4P59827 614 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 ANO4Q32M45 955 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 XKR3Q5GH77 459 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 NEK9Q8TD19 979 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 POMGNT1Q8WZA1 660 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 UNC93B1Q9H1C4 597 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 MGAT5BQ3V5L5 792 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 GPBP1Q86WP2 473 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 TDHQ8IZJ6 230 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 BADQ92934 168 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 SEPT5Q99719 369 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 LLPHQ9BRT6 129 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 PCDHA4Q9UN74 947 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 ARHGEF28Q8N1W1 1705 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 FSD2A1L4K1 749 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 NCK2O43639 380 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 PSMC5P62195 406 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 BYSLQ13895 437 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 GOLGA5Q8TBA6 731 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 ANKRD36BP1Q96IX9 119 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 DCBLD2Q96PD2 775 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 PRDM12Q9H4Q4 367 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 PTPN22Q9Y2R2 807 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 SNCAIPQ9Y6H5 919 aa6.16□□□□□ -1.42
CDC42BPA-209ENST00000448940 WTIPA6NIX2 430 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 CETN3O15182 167 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZRSR2Q15696 482 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 TTC25Q96NG3 672 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 ST7Q9NRC1 585 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 WBP1LQ9NX94 342 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 NCKAP1Q9Y2A7 1128 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 EMSYQ7Z589 1322 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 CALUO43852 315 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 QARSP47897 775 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 PSEN2P49810 448 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 COPB1P53618 953 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 GRM4Q14833 912 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 AMIGO3Q86WK7 504 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZNF274Q96GC6 653 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZNF558Q96NG5 402 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 SLC45A1Q9Y2W3 748 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 MRPS23Q9Y3D9 190 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 RFX7Q2KHR2 1363 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 SYNGAP1Q96PV0 1343 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 SPTLC2O15270 562 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 NMT2O60551 498 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 TECP42680 631 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 ITGA7Q13683 1181 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 SURF1Q15526 300 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCDC144BQ3MJ40 725 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 MSL3Q8N5Y2 521 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 EFCAB3Q8N7B9 438 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 GPRASP2Q96D09 838 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 MRPL17Q9NRX2 175 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 PCDHB6Q9Y5E3 794 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 GAKO14976 1311 aa6.15□□□□□ -1.42
CDC42BPA-209ENST00000448940 ASAP2O43150 1006 aa6.15□□□□□ -1.43
CDC42BPA-209ENST00000448940 DUSP11O75319 330 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-209ENST00000448940 SGPL1O95470 568 aa6.15□□□□□ -1.43
CDC42BPA-209ENST00000448940 PPP1R2P41236 205 aa6.15□□□□□ -1.43
CDC42BPA-209ENST00000448940 ADCY1Q08828 1119 aa6.15□□□□□ -1.43
CDC42BPA-209ENST00000448940 ELAVL2Q12926 359 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-209ENST00000448940 TRIM63Q969Q1 353 aa6.15□□□□□ -1.43
CDC42BPA-209ENST00000448940 NFAT5O94916 1531 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms