RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 DDX39AO00148 427 aaKnown RBP15.1■□□□□ 0.01
HMGB3-204ENST00000448905 IPO5O00410 1097 aaKnown RBP15.1■□□□□ 0.01
HMGB3-204ENST00000448905 IBSPP21815 317 aaPredicted RBP15.1■□□□□ 0.01
HMGB3-204ENST00000448905 IRS1P35568 1242 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 CRYBB1P53674 252 aaPredicted RBP15.1■□□□□ 0.01
HMGB3-204ENST00000448905 RCAN1P53805 252 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 AKAP17AQ02040 695 aaKnown RBP15.1■□□□□ 0.01
HMGB3-204ENST00000448905 DLX2Q07687 328 aaPredicted RBP15.1■□□□□ 0.01
HMGB3-204ENST00000448905 TMEM266Q2M3C6 531 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 BMP2KLQ5H9B9 411 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 KIAA0319LQ8IZA0 1049 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 LINC01599Q8WXQ3 324 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 PGBD1Q96JS3 809 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 ADAM2Q99965 735 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 ZNF577Q9BSK1 485 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 ATP6V0A4Q9HBG4 840 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 BRPF3Q9ULD4 1205 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 ST3GAL5Q9UNP4 418 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 CEP131Q9UPN4 1083 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 MICAL3Q7RTP6 2002 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 COL1A2P08123 1366 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 DOCK5Q9H7D0 1870 aa15.1■□□□□ 0.01
HMGB3-204ENST00000448905 EYA4O95677 639 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 PSAPP07602 524 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 CYP3A4P08684 503 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 SRGAP2BP0DMP2 458 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 TMOD1P28289 359 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 GNA11P29992 359 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 NRIP1P48552 1158 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 FUT2Q10981 343 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 CAMK1Q14012 370 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 RBM23Q86U06 439 aaKnown RBP15.09■□□□□ 0.01
HMGB3-204ENST00000448905 SMAP1Q8IYB5 467 aaPredicted RBP15.09■□□□□ 0.01
HMGB3-204ENST00000448905 METTL13Q8N6R0 699 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 BBXQ8WY36 941 aaPredicted RBP15.09■□□□□ 0.01
HMGB3-204ENST00000448905 TMEM260Q9NX78 707 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
HMGB3-204ENST00000448905 SAMM50Q9Y512 469 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 BRWD1Q9NSI6 2320 aa15.09■□□□□ 0.01
HMGB3-204ENST00000448905 LAMA4Q16363 1823 aa15.08■□□□□ 0.01
HMGB3-204ENST00000448905 TBKBP1A7MCY6 615 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 MAGEB2O15479 319 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 LINC01565O15544 149 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 CCNE2O96020 404 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 ZSCAN20P17040 1043 aaPredicted RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 DNAJB1P25685 340 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 0
HMGB3-204ENST00000448905 CLK2P49760 499 aaKnown RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 SETQ01105 290 aaPredicted RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 COASYQ13057 564 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 PKN1Q16512 942 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 PFKFB3Q16875 520 aaPredicted RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 HERC4Q5GLZ8 1057 aaPredicted RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 TYW1BQ6NUM6 668 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 ZNF746Q6NUN9 644 aaPredicted RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 RNF135Q8IUD6 432 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 THNSL1Q8IYQ7 743 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 BICD2Q8TD16 824 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 CDCA3Q99618 268 aaPredicted RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 TMX1Q9H3N1 280 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 ELAC1Q9H777 363 aaKnown RBP15.08■□□□□ 0
HMGB3-204ENST00000448905 ERVK-5Q9HDB9 667 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 NRBP2Q9NSY0 501 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 PCDHA10Q9Y5I2 948 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 COL4A6Q14031 1691 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 CNTNAP5Q8WYK1 1306 aa15.08■□□□□ 0
HMGB3-204ENST00000448905 BAZ2BQ9UIF8 2168 aaKnown RBP15.07■□□□□ 0
HMGB3-204ENST00000448905 FAM86B1E9PN63 330 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 HOXA2O43364 376 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 TBX10O75333 385 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 FAM86B2P0C5J1 330 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 ADD1P35611 737 aaKnown RBP15.07■□□□□ 0
HMGB3-204ENST00000448905 METAP2P50579 478 aaKnown RBP eCLIP15.07■□□□□ 0
HMGB3-204ENST00000448905 FAM189BP81408 668 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 KRT17Q04695 432 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
HMGB3-204ENST00000448905 ALYREFQ86V81 257 aaKnown RBP15.07■□□□□ 0
HMGB3-204ENST00000448905 EDAQ92838 391 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 MSLNLQ96KJ4 702 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 FAM167AQ96KS9 214 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 CDHR5Q9HBB8 845 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 TLR9Q9NR96 1032 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 TYW1Q9NV66 732 aaKnown RBP15.07■□□□□ 0
HMGB3-204ENST00000448905 TMEM161AQ9NX61 479 aa15.07■□□□□ 0
HMGB3-204ENST00000448905 MAFBQ9Y5Q3 323 aaPredicted RBP15.07■□□□□ 0
HMGB3-204ENST00000448905 C9IYK1 514 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 DHX15O43143 795 aaKnown RBP15.06■□□□□ 0
HMGB3-204ENST00000448905 FGF18O76093 207 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 KIZQ2M2Z5 673 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 FAM102BQ5T8I3 360 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 TRMT1LQ7Z2T5 733 aaKnown RBP15.06■□□□□ 0
HMGB3-204ENST00000448905 CCDC60Q8IWA6 550 aaPredicted RBP15.06■□□□□ 0
HMGB3-204ENST00000448905 ABI1Q8IZP0 508 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 REXO1Q8N1G1 1221 aaKnown RBP15.06■□□□□ 0
HMGB3-204ENST00000448905 TCEANC2Q96MN5 208 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 MAP7D2Q96T17 732 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 ZMYND12Q9H0C1 365 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 CLEC1BQ9P126 229 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 MUTYHQ9UIF7 546 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms