RNA–Protein interactions for RNA: ENST00000448437.6

STRC-204, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 2,518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-204ENST00000448437 IRF2BP2Q7Z5L9 587 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 CCHCR1Q8TD31 782 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.82□□□□□ -0.2
STRC-204ENST00000448437 BATF3Q9NR55 127 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 NOP53Q9NZM5 478 aaKnown RBP13.82□□□□□ -0.2
STRC-204ENST00000448437 UBOX5O94941 541 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 TDP2O95551 362 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 MMP13P45452 471 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
STRC-204ENST00000448437 PMS2P54278 862 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 PLTPP55058 493 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 RIPK1Q13546 671 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 REXO1Q8N1G1 1221 aaKnown RBP13.82□□□□□ -0.2
STRC-204ENST00000448437 RASGEF1CQ8N431 466 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 SEC14L1Q92503 715 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 CEP63Q96MT8 703 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 ZNF570Q96NI8 536 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 RAB17Q9H0T7 212 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 ADAM7Q9H2U9 754 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 KIF9Q9HAQ2 790 aa13.82□□□□□ -0.2
STRC-204ENST00000448437 AFF2P51816 1311 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 FLOT1O75955 427 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 GNA14O95837 355 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 NQO1P15559 274 aaKnown RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 HSPA1LP34931 641 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 PDE6BP35913 854 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 SLCO1A2P46721 670 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 ALDH5A1P51649 535 aaPredicted RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 EVA1CP58658 441 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 DR1Q01658 176 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 L3MBTL3Q96JM7 780 aaPredicted RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 FAM84BQ96KN1 310 aaPredicted RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 TMEM47Q9BQJ4 181 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 SUCLA2Q9P2R7 463 aaPredicted RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 KAT6BQ8WYB5 2073 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 PALM3A6NDB9 673 aaPredicted RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 IL6STP40189 918 aaPredicted RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 ADAM9Q13443 819 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 ECM1Q16610 540 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 SBK1Q52WX2 424 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 NT5DC3Q86UY8 548 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 KIF2BQ8N4N8 673 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 SLC44A5Q8NCS7 719 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 ARMC2Q8NEN0 867 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 GLG1Q92896 1179 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 GJA10Q969M2 543 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 TXLNGYQ9BZA5 131 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 LRRC27Q9C0I9 530 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 NSRP1Q9H0G5 558 aaKnown RBP13.81□□□□□ -0.2
STRC-204ENST00000448437 EPB41L4BQ9H329 900 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 ZHX3Q9H4I2 956 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 ECT2Q9H8V3 914 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 STK38LQ9Y2H1 464 aa13.81□□□□□ -0.2
STRC-204ENST00000448437 DCCP43146 1447 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 CCDC169A6NNP5 214 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 A8MUI8 341 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 KIF3CO14782 793 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 UCHL3P15374 230 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 KLRK1P26718 216 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
STRC-204ENST00000448437 GRIK3Q13003 919 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 SLC29A2Q14542 456 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 ZNF268Q14587 947 aaPredicted RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 DNAJC19Q96DA6 116 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 UIMC1Q96RL1 719 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 PABPC3Q9H361 631 aaKnown RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 SHANK3Q9BYB0 1731 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 NPHP3-ACAD11A0A0J9YXS1 232 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 IGF2BP3O00425 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
STRC-204ENST00000448437 H2AFZP0C0S5 128 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 RARAP10276 462 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 NCALDP61601 193 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 UBAP2Q5T6F2 1119 aaKnown RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 C1QTNF12Q5T7M4 302 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 CAPRIN2Q6IMN6 1127 aaKnown RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 H2AFVQ71UI9 128 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 SYCE1Q8N0S2 351 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 SPICE1Q8N0Z3 855 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 ZNF483Q8TF39 744 aaPredicted RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 U2AF1L4Q8WU68 220 aaKnown RBP13.8□□□□□ -0.2
STRC-204ENST00000448437 PGM2Q96G03 612 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 HDAC9Q9UKV0 1011 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 AMFRQ9UKV5 643 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 SNX24Q9Y343 169 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 DAAM1Q9Y4D1 1078 aa13.8□□□□□ -0.2
STRC-204ENST00000448437 COL4A1P02462 1669 aa13.79□□□□□ -0.2
STRC-204ENST00000448437 NUDT17P0C025 328 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms