RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 COBLO75128 1261 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CSDE1O75534 798 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 CLPTM1O96005 669 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 MYL4P12829 197 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CDH3P22223 829 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 STX2P32856 288 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 KIF23Q02241 960 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 ARMC3Q5W041 872 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ZFP1Q6P2D0 407 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 C6orf89Q6UWU4 347 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ZNF572Q7Z3I7 529 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 CARNMT1Q8N4J0 409 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ICA1LQ8NDH6 482 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 AENQ8WTP8 325 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 NACAP1Q9BZK3 213 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 C6orf62Q9GZU0 229 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 CNOT7Q9UIV1 285 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 ATP7BP35670 1465 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 H3BQF6 201 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 H3BRJ5 948 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 DKC1O60832 514 aaKnown RBP eCLIP3.13□□□□□ -1.912e-6■■■□□ 16.1
CHD9-203ENST00000447540 GGPS1O95749 300 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 PYGBP11216 843 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 RXRBP28702 533 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SLC1A1P43005 524 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 DRG2P55039 364 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 GRM1Q13255 1194 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ZC2HC1CQ53FD0 456 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 FIGNQ5HY92 759 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 LRRC8BQ6P9F7 803 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ADGRG6Q86SQ4 1221 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TRIM59Q8IWR1 403 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 NELFCDQ8IXH7 590 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CCDC82Q8N4S0 544 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 THAP9Q9H5L6 903 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 MAGEE1Q9HCI5 957 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 BMP2KQ9NSY1 1161 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 NRBP1Q9UHY1 535 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 GLI2P10070 1586 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 A0A1W2PRG0 241 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ORC4O43929 436 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 MARCH6O60337 910 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 NR1I2O75469 434 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 KRT14P02533 472 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SP100P23497 879 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 PRKAR1BP31321 381 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 HALP42357 657 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CYP4F2P78329 520 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CYP4F3Q08477 520 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 GRSF1Q12849 480 aaKnown RBP eCLIP3.13□□□□□ -1.91
CHD9-203ENST00000447540 ITGA7Q13683 1181 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 DIXDC1Q155Q3 683 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 STOX1Q6ZVD7 989 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TRMT10CQ7L0Y3 403 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 DHX32Q7L7V1 743 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 LUZP2Q86TE4 346 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ZNF354CQ86Y25 554 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CEP70Q8NHQ1 597 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 NEDD1Q8NHV4 660 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CYP39A1Q9NYL5 469 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ASAP1Q9ULH1 1129 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SNX12Q9UMY4 172 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 DNMT1P26358 1616 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 SH3PXD2BA1X283 911 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 VWA5AO00534 786 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ECE2O60344 883 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 KRT37O76014 449 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 GFPT2O94808 682 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ATP1A2P50993 1020 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SNX1Q13596 522 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ACAP2Q15057 778 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SLC35F6Q8N357 371 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ENDOVQ8N8Q3 282 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 RIN3Q8TB24 985 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 DHRS1Q96LJ7 313 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SERPINI1Q99574 410 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 DDX23Q9BUQ8 820 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 DDX47Q9H0S4 455 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 ISCUQ9H1K1 167 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TUBE1Q9UJT0 475 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ANAPC5Q9UJX4 755 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TMCC3Q9ULS5 477 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ARHGAP26Q9UNA1 814 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 BAZ2BQ9UIF8 2168 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 RSPH10B2B2RC85 870 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 WASLO00401 505 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 RSPH10BP0C881 870 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 STAT1P42224 750 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 KIF11P52732 1056 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 GNG2P59768 71 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TRIM67Q6ZTA4 783 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SPATA4Q8NEY3 305 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 EDC3Q96F86 508 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 CDRT15Q96T59 188 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CYTH2Q99418 400 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SPATA16Q9BXB7 569 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 BRD9Q9H8M2 597 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 RABL2AQ9UBK7 228 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 EFR3BQ9Y2G0 817 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 WBP11Q9Y2W2 641 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms