RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TGFB2P61812 414 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 ZNF568Q3ZCX4 644 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 FAM83BQ5T0W9 1011 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 RAPH1Q70E73 1250 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 ERICH1Q86X53 443 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 XXYLT1Q8NBI6 393 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 PREX1Q8TCU6 1659 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 SMARCAD1Q9H4L7 1026 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 GOLGA8MH3BSY2 632 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 SEPT6Q14141 434 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 ZNF280CQ8ND82 737 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 DPP7Q9UHL4 492 aa9.2□□□□□ -0.94
PTPN3-204ENST00000446349 PVALEFA0A1B0GWK0 134 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 HPDP32754 393 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CTNNA1P35221 906 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 GPSM2P81274 684 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 EIF2B5Q13144 721 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 SLMAPQ14BN4 828 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 Q3C1V9 767 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 NSUN7Q8NE18 718 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CHST13Q8NET6 341 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CPS1P31327 1500 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 FOXP2O15409 715 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 KPNA6O60684 536 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ATP2C2O75185 946 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ZBTB7AO95365 584 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CPT1AP50416 773 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 PDE1BQ01064 536 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CAV1Q03135 178 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 NFX1Q12986 1120 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 RSBN1LQ6PCB5 846 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 FAM71BQ8TC56 605 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 DYRK4Q9NR20 520 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CCDC151A5D8V7 595 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 GPC4O75487 556 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CYBBP04839 570 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 KIF2CQ99661 725 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 MED4Q9NPJ6 270 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 STK25O00506 426 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 GSPT1P15170 499 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 TAF1CQ15572 869 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ZNF699Q32M78 642 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ENOX1Q8TC92 643 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ARHGEF2Q92974 986 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 TRIM31Q9BZY9 425 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 MIF4GDA9UHW6 222 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 PHLDB3Q6NSJ2 640 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ANKRD13AQ8IZ07 590 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 SPATA33Q96N06 139 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 MAP3K14Q99558 947 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 TDRD3Q9H7E2 651 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 RCOR1Q9UKL0 485 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 MAD1L1Q9Y6D9 718 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ZBED6P86452 979 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 IL9RQ01113 521 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 SPDYE1Q8NFV5 336 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ATP6V1E2Q96A05 226 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 PSMD3O43242 534 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ZNF18P17022 549 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 SLC16A2P36021 539 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 NDUFA8P51970 172 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 KIF23Q02241 960 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CCNYQ8ND76 341 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 RDM1Q8NG50 284 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 OR6B3Q8NGW1 331 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 NXF1Q9UBU9 619 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 CNOT7Q9UIV1 285 aaKnown RBP9.19□□□□□ -0.94
PTPN3-204ENST00000446349 ORC6Q9Y5N6 252 aa9.19□□□□□ -0.94
PTPN3-204ENST00000446349 POLR1AO95602 1720 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 TAC1P20366 129 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 TBC1D19Q8N5T2 526 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 OR6J1Q8NGC5 347 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 IRAK4Q9NWZ3 460 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 UBE4BO95155 1302 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 KIF20BQ96Q89 1820 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 APOEP02649 317 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 FCGRTP55899 365 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 SPP2Q13103 211 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 KLC2Q9H0B6 622 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 OLFML3Q9NRN5 406 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 SLC13A4Q9UKG4 626 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 PODXLO00592 558 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 GTF2A2P52657 109 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 RNF180Q86T96 592 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 MAGOHBQ96A72 148 aaKnown RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 EFHD1Q9BUP0 239 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 LMBRD1Q9NUN5 540 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 LSM7Q9UK45 103 aaKnown RBP9.18□□□□□ -0.94
PTPN3-204ENST00000446349 PCDHA10Q9Y5I2 948 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 PIK3C2BO00750 1634 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 GH1P01241 217 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 RARBP10826 455 aa9.18□□□□□ -0.94
PTPN3-204ENST00000446349 PLCG1P19174 1290 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms