RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CAPN11Q9UMQ6 739 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 SH2B2O14492 632 aaPredicted RBP19.98■□□□□ 0.79
SHANK3-203ENST00000445220 COPEO14579 308 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 TEDDM1Q5T9Z0 273 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 POMGNT1Q8WZA1 660 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 USP6NLQ92738 828 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 GINM1Q9NU53 330 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 NEK2P51955 445 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 NFRKBQ6P4R8 1299 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 SAYSD1Q9NPB0 183 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 SCHIP1Q9P0W5 487 aaPredicted RBP19.98■□□□□ 0.79
SHANK3-203ENST00000445220 HDAC6Q9UBN7 1215 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 CA8P35219 290 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 SMYD3Q9H7B4 428 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 MLXIPQ9HAP2 919 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 A2ML1A8K2U0 1454 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 BBOX1O75936 387 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 PIK3CAP42336 1068 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 XKR9Q5GH70 373 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 ARL6IP4Q66PJ3 421 aaKnown RBP19.98■□□□□ 0.79
SHANK3-203ENST00000445220 AMNQ9BXJ7 453 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 SPON1Q9HCB6 807 aa19.98■□□□□ 0.79
SHANK3-203ENST00000445220 GSTA4O15217 222 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 ARFIP2P53365 341 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 E4F1Q66K89 784 aaPredicted RBP19.97■□□□□ 0.79
SHANK3-203ENST00000445220 PCDHB4Q9Y5E5 795 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 GOLGA8HP0CJ92 632 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 PTPREP23469 700 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 CEP72Q9P209 647 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 HNRNPCL1O60812 293 aaKnown RBP19.97■□□□□ 0.79
SHANK3-203ENST00000445220 HNRNPH1P31943 449 aaKnown RBP19.97■□□□□ 0.79
SHANK3-203ENST00000445220 LIFRP42702 1097 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 CCZ1BP86790 482 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 CCZ1P86791 482 aaPredicted RBP19.97■□□□□ 0.79
SHANK3-203ENST00000445220 PABPC4Q13310 644 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHANK3-203ENST00000445220 PRPSAP1Q14558 356 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 EMILIN3Q9NT22 766 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 NOD1Q9Y239 953 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 CCND1P24385 295 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 CYP4A11Q02928 519 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 ZNF579Q8NAF0 562 aaKnown RBP19.97■□□□□ 0.79
SHANK3-203ENST00000445220 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.97■□□□□ 0.794e-7■■■■■ 89.4
SHANK3-203ENST00000445220 TTC25Q96NG3 672 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 PCDHA1Q9Y5I3 950 aa19.97■□□□□ 0.79
SHANK3-203ENST00000445220 KIAA0825Q8IV33 1275 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 SLC17A8Q8NDX2 589 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 PALMDQ9NP74 551 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 MRPL40Q9NQ50 206 aaKnown RBP19.96■□□□□ 0.79
SHANK3-203ENST00000445220 TRAF3IP3Q9Y228 551 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 DMP1Q13316 513 aaPredicted RBP19.96■□□□□ 0.79
SHANK3-203ENST00000445220 TMEM259Q4ZIN3 620 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 ARHGEF16Q5VV41 709 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 TMED8Q6PL24 325 aaPredicted RBP19.96■□□□□ 0.79
SHANK3-203ENST00000445220 PI4K2BQ8TCG2 481 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 SLITRK6Q9H5Y7 841 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 ARL2BPQ9Y2Y0 163 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 DARS2Q6PI48 645 aaKnown RBP19.96■□□□□ 0.79
SHANK3-203ENST00000445220 PPP4R3CPQ6ZMV5 832 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 TEX2Q8IWB9 1127 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 PALM3A6NDB9 673 aaPredicted RBP19.96■□□□□ 0.79
SHANK3-203ENST00000445220 CAPN9O14815 690 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 ARHGEF9O43307 516 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 CDC25AP30304 524 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 ABCB5Q2M3G0 1257 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 SPATA4Q8NEY3 305 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 TTLL11Q8NHH1 800 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 MLXIPLQ9NP71 852 aa19.96■□□□□ 0.79
SHANK3-203ENST00000445220 H7C1W4 665 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 PLCG1P19174 1290 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 SPOPLQ6IQ16 392 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 RASGRP4Q8TDF6 673 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 GJD4Q96KN9 370 aaPredicted RBP19.95■□□□□ 0.78
SHANK3-203ENST00000445220 FBXL5Q9UKA1 691 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 CSADQ9Y600 493 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 PRAMEF22A3QJZ6 481 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 FAM187AA6NFU0 413 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 SASH1O94885 1247 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 SPATA21Q7Z572 469 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 UBE2TQ9NPD8 197 aaPredicted RBP19.95■□□□□ 0.78
SHANK3-203ENST00000445220 DCTN4Q9UJW0 460 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 HSPA4LO95757 839 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 ATP1A1P05023 1023 aaKnown RBP19.95■□□□□ 0.78
SHANK3-203ENST00000445220 ALAS1P13196 640 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 EPHB1P54762 984 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 ILDR1Q86SU0 546 aaPredicted RBP19.95■□□□□ 0.78
SHANK3-203ENST00000445220 ZBTB8OSQ8IWT0 167 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 OSBP2Q969R2 916 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.95■□□□□ 0.781e-6■■□□□ 12.8
SHANK3-203ENST00000445220 GDAQ9Y2T3 454 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 TMEM191BP0C7N4 346 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 SCNN1DP51172 638 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 CALR3Q96L12 384 aaKnown RBP19.95■□□□□ 0.78
SHANK3-203ENST00000445220 ING2Q9H160 280 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 DISC1Q9NRI5 854 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 SNX5Q9Y5X3 404 aa19.95■□□□□ 0.78
SHANK3-203ENST00000445220 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
SHANK3-203ENST00000445220 KDM1AO60341 852 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 ECM2O94769 699 aaPredicted RBP19.94■□□□□ 0.78
SHANK3-203ENST00000445220 DYNLT1P63172 113 aa19.94■□□□□ 0.78
SHANK3-203ENST00000445220 MRPS35P82673 323 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms